RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CASP6P55212 293 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 TGFBR3Q03167 851 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 WDR38Q5JTN6 314 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 ZNF544Q6NX49 715 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 NCCRP1Q6ZVX7 275 aaPredicted RBP26.74■■□□□ 1.87
CTCF-203ENST00000566078 BCL2L2Q92843 193 aaPredicted RBP26.74■■□□□ 1.87
CTCF-203ENST00000566078 HDHD2Q9H0R4 259 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 NIPAL2Q9H841 368 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 RNF121Q9H920 327 aa26.74■■□□□ 1.87
CTCF-203ENST00000566078 TRGV8A0A0C4DH27 118 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 A0A0G2JNJ9 132 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 HLA-HP01893 362 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 COX5AP20674 150 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 DCTDP32321 178 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 KIR3DL2P43630 455 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 PSG4Q00888 419 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 TRAM1Q15629 374 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 CATSPERDQ86XM0 798 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 GABRG1Q8N1C3 465 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 AKR7LQ8NHP1 331 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 WNT5BQ9H1J7 359 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 RNF167Q9H6Y7 350 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 Q9UFV3 132 aa26.73■■□□□ 1.87
CTCF-203ENST00000566078 TMEM269A0A1B0GVZ9 245 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 LOC110117498-PIK3R3F6TDL0 507 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 RAD51DO75771 328 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 RGS9O75916 674 aaPredicted RBP26.72■■□□□ 1.87
CTCF-203ENST00000566078 ZFPL1O95159 310 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 HLA-DPB1P04440 258 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 PRKXP51817 358 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 PSMA6P60900 246 aaKnown RBP26.72■■□□□ 1.87
CTCF-203ENST00000566078 CD200R1LQ6Q8B3 271 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 GDPGP1Q6ZNW5 385 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 ZNF433Q8N7K0 673 aaPredicted RBP26.72■■□□□ 1.87
CTCF-203ENST00000566078 OR5AK2Q8NH90 309 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 DCLRE1CQ96SD1 692 aaKnown RBP26.72■■□□□ 1.87
CTCF-203ENST00000566078 HDHD5Q9BXW7 423 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 COL6A6A6NMZ7 2263 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 CIB4A0PJX0 185 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 SLC22A1O15245 554 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 SYNGR3O43761 229 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 GPRIN2O60269 458 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 OPRM1P35372 400 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 SPCS2Q15005 226 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 TBRG1Q3YBR2 411 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 BEND4Q6ZU67 534 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 OR13C5Q8NGS8 318 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 KCNJ15Q99712 375 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 BRD7Q9NPI1 651 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 FAM206AQ9NX38 181 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 GALNT8Q9NY28 637 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 IGSF10Q6WRI0 2623 aa26.72■■□□□ 1.87
CTCF-203ENST00000566078 TRDV1A0A1B0GX56 115 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 ZNF503-AS2A6NEH8 195 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 OR4C45A6NMZ5 311 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 GABRPO00591 440 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 CD79AP11912 226 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 CX3CR1P49238 355 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 CCR9P51686 369 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 TUBA1BP68363 451 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 GALK2Q01415 458 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 INSL4Q14641 139 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 ODF4Q2M2E3 257 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 TUBA1AQ71U36 451 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 MS4A15Q8N5U1 240 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 ZNF283Q8N7M2 679 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 OR1F12Q8NHA8 337 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 COMMD4Q9H0A8 199 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 G6PC2Q9NQR9 355 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 TXNL4BQ9NX01 149 aaKnown RBP26.71■■□□□ 1.87
CTCF-203ENST00000566078 OR52A1Q9UKL2 312 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 SLC22A13Q9Y226 551 aa26.71■■□□□ 1.87
CTCF-203ENST00000566078 TMEM212A6NML5 194 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 E9PLN8 166 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 UBL3O95164 117 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 MMP16P51512 607 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 PABPC1L2AQ5JQF8 200 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 C22orf42Q6IC83 251 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 CXorf67Q86X51 503 aaPredicted RBP26.7■■□□□ 1.86
CTCF-203ENST00000566078 ZNF676Q8N7Q3 588 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 IL17RDQ8NFM7 739 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 NDNFQ8TB73 568 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 NANOS1Q8WY41 292 aaKnown RBP26.7■■□□□ 1.86
CTCF-203ENST00000566078 SLC7A6Q92536 515 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 VKORC1Q9BQB6 163 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 ZNF281Q9Y2X9 895 aa26.7■■□□□ 1.86
CTCF-203ENST00000566078 OR6C6A6NF89 314 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 BMP5P22003 454 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 CA7P43166 264 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 HTR5AP47898 357 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 ECH1Q13011 328 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 TSC22D1Q15714 1073 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 GABRA6Q16445 453 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 BCL2L15Q5TBC7 163 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 TMEM53Q6P2H8 277 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 ABHD4Q8TB40 342 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 SPTSSAQ969W0 71 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 PPP1R14AQ96A00 147 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 DMRTA2Q96SC8 542 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 COQ7Q99807 217 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms