RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 DDOQ99489 341 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 NIPSNAP1Q9BPW8 284 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 SAP30LQ9HAJ7 183 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 CYB5R1Q9UHQ9 305 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 ZDHHC8Q9ULC8 765 aa16.95■□□□□ 0.3
CMTM3-211ENST00000565922 DEAF1O75398 565 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-211ENST00000565922 IGHV4-31P0DP07 118 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 ANXA8P13928 327 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 GPR6P46095 362 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-211ENST00000565922 MMP15P51511 669 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 SLC25A1P53007 311 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 CCL8P80075 99 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 CORO6Q6QEF8 472 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 OR4Q3Q8NH05 313 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 HPS1Q92902 700 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 APOBEC3DQ96AK3 386 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-211ENST00000565922 PITX2Q99697 317 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 ATF6BQ99941 703 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 RBM4Q9BWF3 364 aaKnown RBP16.94■□□□□ 0.3
CMTM3-211ENST00000565922 EGLN1Q9GZT9 426 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 MALRD1Q5VYJ5 2156 aa16.94■□□□□ 0.3
CMTM3-211ENST00000565922 LYNX1G3V0Z9 82 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 CRLF1O75462 422 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 ADH4P08319 380 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 LYNX1P0DP58 116 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 ZNF16P17020 682 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-211ENST00000565922 FMO3P31513 532 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 PYCR1P32322 319 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 GRK5P34947 590 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 CRMP1Q14194 572 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 ZNF362Q5T0B9 420 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-211ENST00000565922 SLC27A4Q6P1M0 643 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 LINC00346Q8IVM7 164 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 DNAJC9Q8WXX5 260 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 SLC7A6Q92536 515 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 PTP4A1Q93096 173 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 NRBF2Q96F24 287 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 ELMOD3Q96FG2 381 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 TEX12Q9BXU0 123 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 CMC2Q9NRP2 79 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 ZNF275Q9NSD4 429 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-211ENST00000565922 MRPL22Q9NWU5 206 aaKnown RBP16.93■□□□□ 0.3
CMTM3-211ENST00000565922 TMEM160Q9NX00 188 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 NAV3Q8IVL0 2385 aa16.93■□□□□ 0.3
CMTM3-211ENST00000565922 SPRY3O43610 288 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 LILRA1O75019 489 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 DBHP09172 617 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 RAC2P15153 192 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 KITLGP21583 273 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 PAICSP22234 425 aaKnown RBP16.92■□□□□ 0.3
CMTM3-211ENST00000565922 TNFSF4P23510 183 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 COL8A2P25067 703 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 GGT2P36268 569 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 CRYBB2P43320 205 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 PSG7Q13046 419 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 TSTQ16762 297 aaKnown RBP16.92■□□□□ 0.3
CMTM3-211ENST00000565922 FAM166AQ6J272 317 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 CFAP77Q6ZQR2 320 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 OR9Q1Q8NGQ5 310 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 PURGQ9UJV8 347 aaKnown RBP16.92■□□□□ 0.3
CMTM3-211ENST00000565922 STARD10Q9Y365 291 aa16.92■□□□□ 0.3
CMTM3-211ENST00000565922 IGHV1-69-2A0A0G2JMI3 117 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 RP2O75695 350 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 IGHV1-46P01743 117 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 OSMP13725 252 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 SPI1P17947 270 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 HFEQ30201 348 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 SHQ1Q6PI26 577 aaKnown RBP16.91■□□□□ 0.3
CMTM3-211ENST00000565922 USP51Q70EK9 711 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 TMEM179BQ7Z7N9 219 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 ATG16L2Q8NAA4 619 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 OR6K6Q8NGW6 343 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 YIPF5Q969M3 257 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 SPTSSAQ969W0 71 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 HAVCR1Q96D42 359 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 NMNAT2Q9BZQ4 307 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 KIF17Q9P2E2 1029 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 KCNS2Q9ULS6 477 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 COMMD3-BMI1R4GMX3 469 aa16.91■□□□□ 0.3
CMTM3-211ENST00000565922 LOC100289279A0A1B0GTE1 492 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 LRP5LA4QPB2 252 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 PPIHO43447 177 aaKnown RBP16.9■□□□□ 0.3
CMTM3-211ENST00000565922 CDC14BO60729 498 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 CD55P08174 381 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 POU1F1P28069 291 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 ENTPD1P49961 510 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 TPTEP56180 551 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 SLC3A1Q07837 685 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 TMEM255AQ5JRV8 349 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 C1orf146Q5VVC0 180 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 FBXW12Q6X9E4 464 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 HIPK1Q86Z02 1210 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 OR51L1Q8NGJ5 315 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 GTF3AQ92664 365 aaKnown RBP16.9■□□□□ 0.3
CMTM3-211ENST00000565922 CMBLQ96DG6 245 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 MSI2Q96DH6 328 aaKnown RBP16.9■□□□□ 0.3
CMTM3-211ENST00000565922 TIMD4Q96H15 378 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 LPAR3Q9UBY5 353 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 CDC42EP3Q9UKI2 254 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms