RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GRAMD2BQ96HH9 432 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PLEKHA3Q9HB20 300 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CTSFQ9UBX1 484 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PPIEQ9UNP9 301 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 MRPS18BQ9Y676 258 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 GGT3PA6NGU5 568 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 M0QZ24 198 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ACSM4P0C7M7 580 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ACP2P11117 423 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 MVDP53602 400 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CLDN8P56748 225 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 FOXO1Q12778 655 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ETFDHQ16134 617 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PABPC1L2AQ5JQF8 200 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CPZQ66K79 652 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZNF773Q6PK81 442 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZNF485Q8NCK3 441 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TTC9Q92623 222 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ANKRD60Q9BZ19 345 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CHRDQ9H2X0 955 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 WDR54Q9H977 334 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LIN7BQ9HAP6 207 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ELF5Q9UKW6 265 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 A0A075B6Q4 140 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 DUXBA0A1W2PPF3 345 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SPINT2O43291 252 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LGI1O95970 557 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TMIGD3P0DMS9 266 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 HTR1EP28566 365 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR10A3P58181 314 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 UBE2G2P60604 165 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CDK5R2Q13319 367 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ELAVL1Q15717 326 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 ATP1A1-AS1Q5TC04 95 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 AADACL4Q5VUY2 407 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KDM4DQ6B0I6 523 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LINGO2Q7L985 606 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 BEST3Q8N1M1 668 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 STPG3Q8N7X2 389 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TMEM105Q8N8V8 129 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZBTB34Q8NCN2 500 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NFAM1Q8NET5 270 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR2L3Q8NG85 312 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ST8SIA4Q92187 359 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 DIRAS2Q96HU8 199 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KIRREL1Q96J84 757 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 DHRS9Q9BPW9 319 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZMAT3Q9HA38 289 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 UTP20O75691 2785 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ASXL3Q9C0F0 2248 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 A0A0J9YY10 115 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SLC1A7O00341 560 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZFAND5O76080 213 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SEMA4FO95754 770 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NGFRP08138 427 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 FOLR1P15328 257 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NTF3P20783 257 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SLC2A5P22732 501 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SFTPDP35247 375 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 GDF7Q7Z4P5 450 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 MAML2Q8IZL2 1156 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 ARRDC1Q8N5I2 433 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 EIF4E3Q8N5X7 224 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 FADS6Q8N9I5 356 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 MS4A6EQ96DS6 147 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CHST6Q9GZX3 395 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR51B6Q9H340 312 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PLEKHF2Q9H8W4 249 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ATRXP46100 2492 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ATG2AQ2TAZ0 1938 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KMT2EQ8IZD2 1858 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CTDSP2O14595 271 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KCNAB3O43448 404 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KLK8O60259 260 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TSC22D2O75157 780 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 WBP4O75554 376 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 RPS27AP62979 156 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 UBA52P62987 128 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 DUSP5Q16690 384 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TSTQ16762 297 aaKnown RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 SMIM21Q3B7S5 101 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ADPRMQ3LIE5 342 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 C22orf42Q6IC83 251 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NUP43Q8NFH3 380 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR52R1Q8NGF1 315 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR4C3Q8NH37 302 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TREX2Q9BQ50 279 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 CPPED1Q9BRF8 314 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 NIPSNAP3BQ9BS92 247 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LRRC61Q9BV99 259 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KLF13Q9Y2Y9 288 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 NUBP2Q9Y5Y2 271 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PMF1-BGLAPU3KQ54 211 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 KIAA0513O60268 411 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 GNG2P59768 71 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 DMRTA1Q5VZB9 504 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LRP11Q86VZ4 500 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR51G2Q8NGK0 314 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZNF471Q9BX82 626 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms