RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ABHD12Q8N2K0 398 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 MTURNQ8N3F0 131 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 CLDN19Q8N6F1 224 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 METTL13Q8N6R0 699 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 ARL14EPQ8N8R7 260 aaPredicted RBP4.19□□□□□ -1.74
SMG1-207ENST00000563235 ZFP28Q8NHY6 868 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 COQ8AQ8NI60 647 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 GNPDA2Q8TDQ7 276 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 C12orf43Q96C57 262 aaKnown RBP4.19□□□□□ -1.74
SMG1-207ENST00000563235 MAGEB18Q96M61 343 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 ZNF599Q96NL3 588 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 EBF4Q9BQW3 602 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 SFXN1Q9H9B4 322 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 TXNRD2Q9NNW7 524 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 B3GNT2Q9NY97 397 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 TMEM181Q9P2C4 612 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 LSM7Q9UK45 103 aaKnown RBP4.19□□□□□ -1.74
SMG1-207ENST00000563235 DNAJC12Q9UKB3 198 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 PLA2G2DQ9UNK4 145 aa4.19□□□□□ -1.74
SMG1-207ENST00000563235 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 LILRA5A6NI73 299 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 TMEM150CB9EJG8 249 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 OVOL3O00110 214 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 RGS16O15492 202 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 CYB5BO43169 146 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 MLNRO43193 412 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 MT-CO2P00403 227 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 HPNP05981 417 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 CELA2BP08218 269 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 HOXD4P09016 255 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 LIMS3P0CW19 117 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 LIMS4P0CW20 117 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 C8orf88P0DMB2 117 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 CCKARP32238 428 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 PTGER1P34995 402 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 RPL13AP40429 203 aaKnown RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 VEGFCP49767 419 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 GAS1P54826 345 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SRYQ05066 204 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 OR8G1Q15617 311 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ODF4Q2M2E3 257 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 CR1LQ2VPA4 569 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 TMEM205Q6UW68 189 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 IZUMO2Q6UXV1 221 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 LANCL3Q6ZV70 420 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SLC36A1Q7Z2H8 476 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 CENPSQ8N2Z9 138 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 D2HGDHQ8N465 521 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 BOLA2Q9H3K6 86 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 NHEJ1Q9H9Q4 299 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 TOGARAM1Q9Y4F4 1720 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 A0A0G2JNJ9 132 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 A0A1B0GW55 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SLC22A23A1A5C7 686 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 CHEK1O14757 476 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 HLA-AP01891 365 aaKnown RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 OR10J4P0C629 311 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L2P0CJ85 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L3P0CJ86 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L4P0CJ87 422 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L5P0CJ88 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L6P0CJ89 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L7P0CJ90 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 RPL21P46778 160 aaKnown RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 OR3A2P47893 321 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 RPS6P62753 249 aaKnown RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 PAFAH1B2P68402 229 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ZNF616Q08AN1 781 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ZNF235Q14590 738 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 C3AR1Q16581 482 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 LRRC75BQ2VPJ9 315 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SAMD13Q5VXD3 122 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 DMKNQ6E0U4 476 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4L9Q6RFH8 374 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 LRRC55Q6ZSA7 311 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 WFDC8Q8IUA0 241 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 MMD2Q8IY49 270 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SVOPLQ8N434 492 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ZNF676Q8N7Q3 588 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 OR6K2Q8NGY2 324 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SHKBP1Q8TBC3 707 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 C10orf82Q8WW14 230 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ZNF382Q96SR6 550 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 SEMA6AQ9H2E6 1030 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 ZNF703Q9H7S9 590 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 HINT3Q9NQE9 182 aaKnown RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 DUX4Q9UBX2 424 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 PLEKHB1Q9UF11 243 aaPredicted RBP4.18□□□□□ -1.74
SMG1-207ENST00000563235 Q9UFV3 132 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 FBXL4Q9UKA2 621 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 PILRBQ9UKJ0 227 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 UBR3Q6ZT12 1888 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 MYH11P35749 1972 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 A0A0A6YYD5 115 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 FAM25AB3EWG3 89 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 FAM25CB3EWG5 89 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 FAM25GB3EWG6 89 aa4.18□□□□□ -1.74
SMG1-207ENST00000563235 H3BTX0 84 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms