RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 OR13H1Q8NG92 308 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 RLN3Q8WXF3 142 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 CNN2Q99439 309 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 RAB11FIP5Q9BXF6 653 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 MYOZ1Q9NP98 299 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 MSGN1A6NI15 193 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 FCMRO60667 390 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 CTSVO60911 334 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 CD1AP06126 327 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 OR8U9P0C7N5 309 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC26A5P58743 744 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 GPR18Q14330 331 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 DEFB134Q4QY38 66 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 BTNL8Q6UX41 500 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF227Q86WZ6 799 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC35F3Q8IY50 421 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 DEFB119Q8N690 84 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 OR9A2Q8NGT5 310 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 OR8U1Q8NH10 309 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 ASB17Q8WXJ9 295 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 METTL9Q9H1A3 318 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 KIR3DX1Q9H7L2 352 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 KCNG2Q9UJ96 466 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 CYP8B1Q9UNU6 501 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 PRAMEF26H0Y7S4 382 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 H3BSH0 61 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF888P0CJ79 500 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC2A1P11166 492 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 HLA-GP17693 338 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF84P51523 738 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ACTBP60709 375 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ACTG1P63261 375 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ID2Q02363 134 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 NHLH2Q02577 135 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 TDGQ13569 410 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 LYG2Q86SG7 212 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 OR2L13Q8N349 312 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 OR6X1Q8NH79 312 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 SCARF2Q96GP6 870 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 OR5B2Q96R09 309 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 KCNE5Q9UJ90 142 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 SEC14L6B5MCN3 397 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 DRD1P21728 446 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 VAMP1P23763 118 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ZBTB25P24278 435 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 MC3RP41968 323 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 PPP1CAP62136 330 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 IL13RA1P78552 427 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 KHDC3LQ587J8 217 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 FBXO42Q6P3S6 717 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 PHB2Q99623 299 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 PRSS27Q9BQR3 290 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 CST11Q9H112 138 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 PTGES2Q9H7Z7 377 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF223Q9UK11 482 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
GTF3C1-203ENST00000562609 TVP23AA6NH52 213 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SHISA7A6NL88 538 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 P2RX6O15547 441 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 EDN3P14138 238 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 NTSP30990 170 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 EXOSC6Q5RKV6 272 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF385CQ66K41 422 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 OR13C8Q8NGS7 320 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 GPX8Q8TED1 209 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ADAM29Q9UKF5 820 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SIGLEC7Q9Y286 467 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 RPP14O95059 124 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF28P17035 718 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 RAB6AP20340 208 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 GRPRP30550 384 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 PPICP45877 212 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SKP1P63208 163 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 TMEM35AQ53FP2 167 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 PRSS41Q7RTY9 318 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 OR52E2Q8NGJ4 325 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 OR1J1Q8NGS3 322 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 TMEM239Q8WW34 195 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 STARD5Q9NSY2 213 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms