RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 IHHQ14623 411 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 P2RY6Q15077 328 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 PON3Q15166 354 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 MRPL23Q16540 153 aaKnown RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SLC36A2Q495M3 483 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 FGD3Q5JSP0 725 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TPRG1LQ5T0D9 272 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NCBP2-AS2Q69YL0 99 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ADNP2Q6IQ32 1131 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ANKRD26P1Q6NSI1 321 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 REEP3Q6NUK4 255 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM207Q6UWW9 146 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 USP43Q70EL4 1123 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 P4HA3Q7Z4N8 544 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 GOLGA7Q7Z5G4 137 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DHDDSQ86SQ9 333 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 HORMAD1Q86X24 394 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SLC37A3Q8NCC5 494 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 OR6X1Q8NH79 312 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF564Q8TBZ8 553 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 LGALS14Q8TCE9 139 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 HCAR2Q8TDS4 363 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 HPSE2Q8WWQ2 592 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ACOT11Q8WXI4 607 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 C22orf15Q8WYQ4 148 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NR4A3Q92570 626 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 GTF3AQ92664 365 aaKnown RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 KLK6Q92876 244 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 FAF2Q96CS3 445 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 LGALS12Q96DT0 336 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 BMFQ96LC9 184 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 JSRP1Q96MG2 331 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DUX3Q96PT4 197 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 F2RL3Q96RI0 385 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TNFRSF13CQ96RJ3 184 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TEAD3Q99594 435 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NKX3-1Q99801 234 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DHRS9Q9BPW9 319 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 DPH7Q9BTV6 452 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ULBP2Q9BZM5 246 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 FAM107BQ9H098 131 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 SYT4Q9H2B2 425 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 TPK1Q9H3S4 243 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NHEJ1Q9H9Q4 299 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 GDF3Q9NR23 364 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 POLE4Q9NR33 117 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CMTM6Q9NX76 183 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 ENOPH1Q9UHY7 261 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NXT1Q9UKK6 140 aaKnown RBP3.47□□□□□ -1.85
LRRC28-222ENST00000561431 KLK13Q9UKR3 277 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 RNF6Q9Y252 685 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 MMACHCQ9Y4U1 282 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 WIF1Q9Y5W5 379 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 NUMA1Q14980 2115 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 EPG5Q9HCE0 2579 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 CACNA1EQ15878 2313 aa3.47□□□□□ -1.85
LRRC28-222ENST00000561431 LRP4O75096 1905 aa3.46□□□□□ -1.85
LRRC28-222ENST00000561431 COL27A1Q8IZC6 1860 aaPredicted RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IGHV4-4A0A075B6R2 117 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SPTY2D1-AS1A0A0U1RR47 76 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 A0A1W2PRD5 423 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IGLON5A6NGN9 336 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SAGE2PA6NJ88 616 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF729A6NN14 1252 aaPredicted RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF487B1APH4 448 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 H3BTX0 84 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 GOSR2O14653 212 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MAGEC1O60732 1142 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CDK2AP2O75956 126 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 AP2A2O94973 939 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 NXPH2O95156 264 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 PAK4O96013 591 aaPredicted RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ACTL6AO96019 429 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SP1P08047 785 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 H2AFZP0C0S5 128 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RD3LP0DJH9 198 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RBMS1P29558 406 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 GCKP35557 465 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 TGFBR2P37173 567 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MAGEA3P43357 314 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RFX3P48380 749 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 LIMK2P53671 638 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 PFN3P60673 137 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 AP1S1P61966 158 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RPS21P63220 83 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SEMG2Q02383 582 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SLC10A7Q0GE19 358 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 BNIP2Q12982 314 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 DYNC1I2Q13409 638 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 FZD2Q14332 565 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 PAFAH1B3Q15102 231 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IRF4Q15306 451 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 TNXAQ16473 311 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CDKN3Q16667 212 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM249Q2WGJ8 235 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 GGTA1PQ4G0N0 100 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM52BQ4KMG9 183 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms