RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TVP23BQ9NYZ1 205 aa11.88□□□□□ -0.51
TPM1-230ENST00000561266 NDRG4Q9ULP0 352 aaKnown RBP11.88□□□□□ -0.51
TPM1-230ENST00000561266 ANKRD65E5RJM6 399 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 M0R233 179 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 ZNF593O00488 134 aaPredicted RBP11.87□□□□□ -0.51
TPM1-230ENST00000561266 PRKYO43930 277 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 ABHD16AO95870 558 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 IFNGP01579 166 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 IGHV3-13P01766 116 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 ZNF3P17036 446 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 COL8A2P25067 703 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 MAGEB1P43366 347 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 MMP15P51511 669 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 EFNB1P98172 346 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 PPP2R2BQ00005 443 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 PSG7Q13046 419 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 HLXQ14774 488 aaPredicted RBP11.87□□□□□ -0.51
TPM1-230ENST00000561266 ZDHHC13Q8IUH4 622 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 OR6K6Q8NGW6 343 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 ZMYND19Q96E35 227 aaPredicted RBP11.87□□□□□ -0.51
TPM1-230ENST00000561266 COQ7Q99807 217 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 OSBPL10Q9BXB5 764 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 REG4Q9BYZ8 158 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 MARCH7Q9H992 704 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 BARX1Q9HBU1 254 aaPredicted RBP11.87□□□□□ -0.51
TPM1-230ENST00000561266 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 KRT84Q9NSB2 600 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 EIF3KQ9UBQ5 218 aaKnown RBP11.87□□□□□ -0.51
TPM1-230ENST00000561266 ABCA2Q9BZC7 2435 aa11.87□□□□□ -0.51
TPM1-230ENST00000561266 A0A1W2PPW3 197 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ZAR1LA6NP61 321 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 VSTM5A8MXK1 200 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 SELENOFO60613 162 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 GLCEO94923 617 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 LY6G6DO95868 133 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 SPARCP09486 303 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ACSM4P0C7M7 580 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 FCGR1AP12314 374 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 BMP4P12644 408 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 FOSL1P15407 271 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ZNF823P16415 610 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 FMO3P31513 532 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ENTPD1P49961 510 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 HCCSP53701 268 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
TPM1-230ENST00000561266 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 SLX4IPQ5VYV7 408 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 MBNL2Q5VZF2 373 aaKnown RBP11.86□□□□□ -0.51
TPM1-230ENST00000561266 C12orf73Q69YU5 71 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 Q6ZR03 302 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 COLCA1Q6ZS62 124 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 DCXRQ7Z4W1 244 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 OR2AJ1Q8NGZ0 328 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ST7LQ8TDW4 575 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 YIPF5Q969M3 257 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 CMBLQ96DG6 245 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 PITX2Q99697 317 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 HDHD2Q9H0R4 259 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ELOVL3Q9HB03 270 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 S100A14Q9HCY8 104 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 TBCCD1Q9NVR7 557 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
TPM1-230ENST00000561266 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 C17orf100A8MU93 164 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 PRR23D1E9PI22 279 aaPredicted RBP11.85□□□□□ -0.51
TPM1-230ENST00000561266 F5H5K5 113 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 LILRA1O75019 489 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 HMGN1P05114 100 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 PRR23D2P0DMB1 279 aaPredicted RBP11.85□□□□□ -0.51
TPM1-230ENST00000561266 GSTT1P30711 240 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 ESRRGP62508 458 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 TEX30Q5JUR7 227 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 DPY19L4Q7Z388 723 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 ERI1Q8IV48 349 aaKnown RBP11.85□□□□□ -0.51
TPM1-230ENST00000561266 DNAJC9Q8WXX5 260 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 FAM168AQ92567 244 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 ATF6BQ99941 703 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 RHNO1Q9BSD3 238 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 RAB1BQ9H0U4 201 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 PTTG3PQ9NZH4 202 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 ATPIF1Q9UII2 106 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
TPM1-230ENST00000561266 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 E9PQ18 207 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 DAOP14920 347 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 IGFBP5P24593 272 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 OTX1P32242 354 aaPredicted RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 APOFQ13790 326 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 SNAPC1Q16533 368 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 CARTPTQ16568 116 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms