RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 OR52L2PQ8NGH6 319 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 OR52I2Q8NH67 350 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SMIM4Q8WVI0 70 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 RFKQ969G6 155 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC25A36Q96CQ1 311 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 TGM7Q96PF1 710 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 WDR13Q9H1Z4 485 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PRO1933Q9H354 126 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SEMA5BQ9P283 1151 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 MYLKQ15746 1914 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 TRAV25A0A0B4J276 109 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ARL5CA6NH57 179 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 CCL24O00175 119 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SIVA1O15304 175 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 BCL2L11O43521 198 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 YIF1AO95070 293 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 RAB40ALP0C0E4 278 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PRPS2P11908 318 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 MYOGP15173 224 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 HOXB4P17483 251 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 TNFRSF1BP20333 461 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 AQP1P29972 269 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 AGTR1P30556 359 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 XCR1P46094 333 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2B8PP59922 312 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 CDK6Q00534 326 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 OC90Q02509 493 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SYT14P1Q58G82 188 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 FJX1Q86VR8 437 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GPSM1Q86YR5 675 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 C1QL4Q86Z23 238 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC30A8Q8IWU4 369 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GCNT2Q8N0V5 402 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 KLHDC9Q8NEP7 349 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4F15Q8NGB8 312 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 HAS2Q92819 552 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF582Q96NG8 517 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 NRIP2Q9BQI9 281 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 MED10Q9BTT4 135 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 CHRDL1Q9BU40 450 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 NDUFAF3Q9BU61 184 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PTGES2Q9H7Z7 377 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ELOVL3Q9HB03 270 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 MMP26Q9NRE1 261 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 NLE1Q9NVX2 485 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 HCSTQ9UBK5 93 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GBF1Q92538 1859 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PATJQ8NI35 1801 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF705EA8MWA4 302 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 A8MWP6 167 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CLDN5O00501 218 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 DLEU1O43261 78 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GCM2O75603 506 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 FARS2O95363 451 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SNRPCP09234 159 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 LIMS3P0CW19 117 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 LIMS4P0CW20 117 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ACP2P11117 423 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CD79AP11912 226 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CELP19835 753 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GATA3P23771 443 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GABRR2P28476 465 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MAP3K8P41279 467 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 KIR2DL1P43626 348 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 KIR2DL2P43627 348 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR1E2P47887 323 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PLA2G7Q13093 441 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF345Q14585 488 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GINS1Q14691 196 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 FAM189A2Q15884 450 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 UPP1Q16831 310 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 EOGTQ5NDL2 527 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SFXN4Q6P4A7 337 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 RNASEKQ6P5S7 137 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 IL34Q6ZMJ4 242 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 C1orf210Q8IVY1 113 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4A4PQ8NGN8 299 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 STOML3Q8TAV4 291 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TSEN15Q8WW01 171 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SORCS1Q8WY21 1168 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TFGQ92734 400 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPL53Q96EL3 112 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 NUDT11Q96G61 164 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF75AQ96N20 296 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SPAG8Q99932 426 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 LAT2Q9GZY6 243 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PLEKHA1Q9HB21 404 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TAS2R13Q9NYV9 303 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PTPRDP23468 1912 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CHD5Q8TDI0 1954 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM210A6NLX4 147 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CHST10O43529 356 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 HYAL3O43820 417 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 B4GALT3O60512 393 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2F2O95006 317 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 AVPP01185 164 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 IFNA17P01571 189 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 312.8 ms