RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CNBD2Q96M20 576 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ZNF607Q96SK3 696 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 C1QTNF5Q9BXJ0 243 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 KAT8Q9H7Z6 458 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 EVA1AQ9H8M9 152 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 NANSQ9NR45 359 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 C20orf141Q9NUB4 165 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 UBAP1Q9NZ09 502 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PTTG2Q9NZH5 202 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ZNF229Q9UJW7 825 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 FBXL3Q9UKT7 428 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ZNF346Q9UL40 294 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 CORO2BQ9UQ03 480 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 AURKCQ9UQB9 309 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 SLC22A23A1A5C7 686 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ELOVL7A1L3X0 281 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TRAPPC13A5PLN9 417 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 EVPLLA8MZ36 301 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 FAM220BPB1ANY3 271 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TRAPPC2LH3BP13 241 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 J3QLI3 93 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TIPRLO75663 272 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC2A10O95528 541 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 BCL10O95999 233 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 IGHG1P01857 330 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 MT-ND1P03886 318 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SCG5P05408 212 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 LCKP06239 509 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ADH4P08319 380 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SMIM18P0DKX4 95 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ZNF32P17041 273 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TNFRSF1BP20333 461 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 PCGF2P35227 344 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CAPGP40121 348 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 AQP2P41181 271 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ERFP50548 548 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ALDH3A2P51648 485 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SEC61A1P61619 476 aaKnown RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 UBA52P62987 128 aaKnown RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 ACTG1P63261 375 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 PSG4Q00888 419 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 LSAMPQ13449 338 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 IL18R1Q13478 541 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 GK3PQ14409 553 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CNPY1Q3B7I2 92 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC36A2Q495M3 483 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 PRR31Q5SQ13 230 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SPATA46Q5T0L3 261 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 THEM4Q5T1C6 240 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TTC23Q5W5X9 447 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SHQ1Q6PI26 577 aaKnown RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 TTC33Q6PID6 262 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC25A47Q6Q0C1 308 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 Q6ZR03 302 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CCDC80Q76M96 950 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC16A14Q7RTX9 510 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 DPPA2Q7Z7J5 298 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CALHM3Q86XJ0 350 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 LRRC18Q8N456 261 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CBR4Q8N4T8 237 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 DHRSXQ8N5I4 330 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 C3orf56Q8N813 242 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 LRRC75AQ8NAA5 344 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SYT14Q8NB59 555 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 C11orf65Q8NCR3 313 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 DEFB108BQ8NET1 73 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 NOXO1Q8NFA2 376 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TSPAN14Q8NG11 270 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 OR2T12Q8NG77 320 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 OR1J1Q8NGS3 322 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC25A40Q8TBP6 338 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TMEM255BQ8WV15 326 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 LIPHQ8WWY8 451 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 GEMIN6Q8WXD5 167 aaKnown RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 C22orf15Q8WYQ4 148 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 C11orf40Q8WZ69 217 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 TAF15Q92804 592 aaKnown RBP eCLIP4.89□□□□□ -1.63
USP3-215ENST00000559771 GCDHQ92947 438 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 MPP4Q96JB8 637 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 EAF1Q96JC9 268 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 ZNF583Q96ND8 569 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CIB1Q99828 191 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 ADI1Q9BV57 179 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CHID1Q9BWS9 393 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 BCL2L14Q9BZR8 327 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SLC19A3Q9BZV2 496 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 OR2J1Q9GZK6 312 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 YIPF3Q9GZM5 350 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 WNT5BQ9H1J7 359 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 POFUT1Q9H488 388 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 CDH20Q9HBT6 801 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 MMP26Q9NRE1 261 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SMPD3Q9NY59 655 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 SLCO1C1Q9NYB5 712 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 USE1Q9NZ43 259 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SELENONQ9NZV5 590 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 DNAJB9Q9UBS3 223 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms