RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ZNF224Q9NZL3 707 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 TRBV2A0A0J9YWF9 115 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 TRDV1A0A1B0GX56 115 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 OR4C45A6NMZ5 311 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 PATE4P0C8F1 98 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 RCVRNP35243 200 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 MAGEB1P43366 347 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 KIR2DL2P43627 348 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF84P51523 738 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 TAS2R43P59537 309 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 IFITM2Q01629 132 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 KRTCAP3Q53RY4 240 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 C6orf183Q5T699 404 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 STEAP3Q658P3 488 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 P4HA3Q7Z4N8 544 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 KRT77Q7Z794 578 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 CD163Q86VB7 1156 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 WNT2BQ93097 391 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
RABGGTA-209ENST00000559551 TBX1O43435 398 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 APOA1P02647 267 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 TPOP07202 933 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 S100A5P33763 92 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 CAPZA2P47755 286 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 ALKBH1Q13686 389 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 KCTD18Q6PI47 426 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 PCSK4Q6UW60 755 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM220AQ7Z4H9 259 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 SKA3Q8IX90 412 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 OR10AC1Q8NH08 325 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 C4orf45Q96LM5 186 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 NXF2Q9GZY0 626 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 NEK6Q9HC98 313 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 CENPMQ9NSP4 180 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 SLC22A13Q9Y226 551 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 POLR1DQ9Y2S0 133 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 CD1AP06126 327 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 TACSTD2P09758 323 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 FGF9P31371 208 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 OR3A2P47893 321 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 VWA1Q6PCB0 445 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 C3P1Q6ZMU1 363 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 NAXEQ8NCW5 288 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 ABHD4Q8TB40 342 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 B3GAT2Q9NPZ5 323 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 G6PC2Q9NQR9 355 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 MALT1Q9UDY8 824 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 SSR3Q9UNL2 185 aa12.53□□□□□ -0.4
RABGGTA-209ENST00000559551 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 DOK2O60496 412 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 TMCC2O75069 709 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 ITGA5P08648 1049 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 CD53P19397 219 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 RIDAP52758 137 aaKnown RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 FAPQ12884 760 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 TIMM50Q3ZCQ8 353 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 TFAP2EQ6VUC0 442 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM214BQ7L5A3 538 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF627Q7L945 461 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 CATSPERDQ86XM0 798 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 RDH10Q8IZV5 341 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM57AQ8TBR7 257 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 TP63Q9H3D4 680 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 NBASA2RRP1 2371 aa12.52□□□□□ -0.4
RABGGTA-209ENST00000559551 POLEQ07864 2286 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 C5orf63A6NC05 138 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 TNFSF13O75888 250 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 IL18BPO95998 194 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 CST2P09228 141 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 MMP7P09237 267 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 NPR2P20594 1047 aa12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 RPS19P39019 145 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-209ENST00000559551 HSPB2Q16082 182 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms