RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RFC3P40938 356 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 EIF1P41567 113 aaKnown RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 GZMKP49863 264 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 GLT8D1Q68CQ7 371 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ANKRD16Q6P6B7 361 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 RTN4RL2Q86UN3 420 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 NAA40Q86UY6 237 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 GTPBP8Q8N3Z3 284 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 ESX1Q8N693 406 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ACBD4Q8NC06 268 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 OR52N4Q8NGI2 321 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 SLC25A28Q96A46 364 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 PLEKHA1Q9HB21 404 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 FOXJ2Q9P0K8 574 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ZNF319Q9P2F9 582 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 KNTC1P50748 2209 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 A0A0J9YW62 118 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 CIB4A0PJX0 185 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 TOXO94900 526 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ABOP16442 354 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 PSMB1P20618 241 aaKnown RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 ACHEP22303 614 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ACP1P24666 158 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 STARP49675 285 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 SELENOPP49908 381 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 OC90Q02509 493 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 PLXDC2Q6UX71 529 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ABHD12BQ7Z5M8 362 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 OR1J2Q8NGS2 313 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 OR6X1Q8NH79 312 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 SLC25A43Q8WUT9 341 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 CMBLQ96DG6 245 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 FAM71F1Q96KD3 344 aaPredicted RBP9.36□□□□□ -0.91
TPM1-210ENST00000558264 SRXN1Q9BYN0 137 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 CHIAQ9BZP6 476 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 HDGFL3Q9Y3E1 203 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 PCDHGA5Q9Y5G8 931 aa9.36□□□□□ -0.91
TPM1-210ENST00000558264 PCSK5Q92824 1860 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 A0A1W2PNU3 283 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 E9PLN8 166 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 C1QBP02746 253 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 HRGP04196 525 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 ZNF121P58317 390 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 GABREP78334 506 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 SLC35A1P78382 337 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 FAM166AQ6J272 317 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 SLC25A47Q6Q0C1 308 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 ZNF704Q6ZNC4 412 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 OR52B4Q8NGK2 314 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 OR4C16Q8NGL9 310 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 OR56B4Q8NH76 319 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 MRI1Q9BV20 369 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 NOX3Q9HBY0 568 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 FANCFQ9NPI8 374 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 DIABLOQ9NR28 239 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 AKAP7Q9P0M2 348 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 TTC28Q96AY4 2481 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 FAM172BPA6NC97 362 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 PEX14O75381 377 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 TRAPPC6AO75865 159 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 RBBP9O75884 186 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 ECDO95905 644 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 UBCP0CG48 685 aaKnown RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 GTF2F2P13984 249 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 MMP16P51512 607 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 DSCR4P56555 118 aaPredicted RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 AP3S2P59780 193 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 ANGPT1Q15389 498 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 TMEM244Q5VVB8 128 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 LAMTOR1Q6IAA8 161 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 FAM57BQ71RH2 274 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 OR14L1PQ8NHC6 308 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 RBM24Q9BX46 236 aaKnown RBP9.35□□□□□ -0.91
TPM1-210ENST00000558264 CNTD2Q9H8S5 307 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 COPZ2Q9P299 210 aa9.35□□□□□ -0.91
TPM1-210ENST00000558264 C9orf172C9J069 976 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 ZNF878C9JN71 531 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 NPIPA2E9PIF3 369 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 NPIPA3F8WFD2 350 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 SULT1B1O43704 296 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 CD3DP04234 171 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 CSN2P05814 226 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 ADH6P28332 368 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 PRSS12P56730 875 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 ZP1P60852 638 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
TPM1-210ENST00000558264 CLPPQ16740 277 aaPredicted RBP9.34□□□□□ -0.91
TPM1-210ENST00000558264 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
TPM1-210ENST00000558264 ELMOD2Q8IZ81 293 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 BEST3Q8N1M1 668 aa9.34□□□□□ -0.91
TPM1-210ENST00000558264 OR11H4Q8NGC9 324 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms