RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PMCHP20382 165 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 M6PRP20645 277 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 DTYMKP23919 212 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 DCKP27707 260 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PRDX3P30048 256 aaKnown RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 MAS1LP35410 378 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 COILP38432 576 aaPredicted RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 CTRLP40313 264 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 MAGEA2P43356 314 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 MAGEA5P43359 124 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 TGM4P49221 684 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 LINC00315P59091 139 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PSME3P61289 254 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 RAD51Q06609 339 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 C2orf54Q08AI8 447 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 BNIP2Q12982 314 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 GPNMBQ14956 572 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 CYTH1Q15438 398 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 NDUFA9Q16795 377 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 KCTD19Q17RG1 926 aaPredicted RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 TMEM249Q2WGJ8 235 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 DUPD1Q68J44 220 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 FAM71F2Q6NXP2 309 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ULK3Q6PHR2 472 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PP632Q6XCG6 107 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 MBOAT1Q6ZNC8 495 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PGAP1Q75T13 922 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 MTURNQ8N3F0 131 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 SYT14Q8NB59 555 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 OR4D5Q8NGN0 318 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 OR6Q1Q8NGQ2 317 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 OR2L8Q8NGY9 312 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 OR6X1Q8NH79 312 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 FAM110BQ8TC76 370 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PYDC1Q8WXC3 89 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 FAM3CQ92520 227 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 NAT6Q93015 286 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 CPNE4Q96A23 557 aaPredicted RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 PELI1Q96FA3 418 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 RMND5BQ96G75 393 aaPredicted RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 RNF170Q96K19 258 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 CCDC42Q96M95 316 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ZNF578Q96N58 590 aaPredicted RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 SLC38A2Q96QD8 506 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 TBX15Q96SF7 602 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 FMO2Q99518 471 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 MCHR1Q99705 422 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 SLC30A2Q9BRI3 323 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 UTP23Q9BRU9 249 aaKnown RBP2.07□□□□□ -2.08
SPG11-206ENST00000558093 DCUN1D5Q9BTE7 237 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 SRXN1Q9BYN0 137 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ULBP2Q9BZM5 246 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 SLC22A4Q9H015 551 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 RACGAP1Q9H0H5 632 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 GBA3Q9H227 469 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 VCXQ9H320 206 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 SMYD3Q9H7B4 428 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 WDR54Q9H977 334 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PLGRKTQ9HBL7 147 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ANKHQ9HCJ1 492 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ABCB9Q9NP78 766 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ASCL3Q9NQ33 180 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PRSS16Q9NQE7 514 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 PARVAQ9NVD7 372 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ANAPC7Q9UJX3 599 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 GSTK1Q9Y2Q3 226 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 ATP10AO60312 1499 aa2.07□□□□□ -2.08
SPG11-206ENST00000558093 IGKV2-28A0A075B6P5 120 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 A0A1B0GUS0 222 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 A0A1W2PQL4 384 aaPredicted RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 PSMB11A5LHX3 300 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SMIM23A6NLE4 172 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 GJE1A6NN92 205 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 OR2AT4A6NND4 320 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 FAM166BA8MTA8 275 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ZNF705EA8MWA4 302 aaPredicted RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 H3BMQ9 156 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ZBTB5O15062 677 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NDUFA2O43678 99 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ICOSLGO75144 302 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 RCBTB2O95199 551 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 VAPBO95292 243 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 PSMG1O95456 288 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 FADS2O95864 444 aaKnown RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 IGKV2D-28P01615 120 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TNNC2P02585 160 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 MMP1P03956 469 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TFPTP0C1Z6 253 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SMIM10L1P0DMW3 83 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 CBR1P16152 277 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NPR2P20594 1047 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 HTR2CP28335 458 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 GABRR2P28476 465 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SERPINB1P30740 379 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 KDELR2P33947 212 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 OMPP47874 163 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 RGS6P49758 472 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 PLA2G16P53816 162 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms