RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR2T27Q8NH04 317 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 ASB17Q8WXJ9 295 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 AKAP1Q92667 903 aaKnown RBP eCLIP18.39■□□□□ 0.53
CASC4-204ENST00000557945 SPTSSAQ969W0 71 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 DDX28Q9NUL7 540 aaKnown RBP18.39■□□□□ 0.53
CASC4-204ENST00000557945 A0A1W2PPR1 153 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 PSMD9O00233 223 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 PHYHO14832 338 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 FAM20BO75063 409 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 ABHD16AO95870 558 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 FAM157BP0CG42 384 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 HSD11B1P28845 292 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 GRB2P62993 217 aaKnown RBP18.38■□□□□ 0.53
CASC4-204ENST00000557945 SNTB2Q13425 540 aaKnown RBP18.38■□□□□ 0.53
CASC4-204ENST00000557945 ZNF672Q499Z4 452 aaPredicted RBP18.38■□□□□ 0.53
CASC4-204ENST00000557945 KLHL22Q53GT1 634 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 LAIR2Q6ISS4 152 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 KCTD18Q6PI47 426 aaPredicted RBP18.38■□□□□ 0.53
CASC4-204ENST00000557945 VHLLQ6RSH7 139 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 ARL9Q6T311 187 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 LRRN1Q6UXK5 716 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 KRT77Q7Z794 578 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 RFLNBQ8N5W9 214 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 BPIFB6Q8NFQ5 453 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 C4orf45Q96LM5 186 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 IKZF2Q9UKS7 526 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 EXOGQ9Y2C4 368 aaKnown RBP18.38■□□□□ 0.53
CASC4-204ENST00000557945 PCDHGB1Q9Y5G3 927 aa18.38■□□□□ 0.53
CASC4-204ENST00000557945 ROS1P08922 2347 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 A0A1W2PQL4 384 aaPredicted RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 FADS2O95864 444 aaKnown RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 PRF1P14222 555 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 NR4A1P22736 598 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 OPRL1P41146 370 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 WNT5AP41221 380 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 PRKXP51817 358 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 TPTEP56180 551 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 ACTC1P68032 377 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 ACTA1P68133 377 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 RAB40BQ12829 278 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 RSPO1Q2MKA7 263 aaPredicted RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 C6orf141Q5SZD1 244 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 ZNF322Q6U7Q0 402 aaPredicted RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 OR52I1Q8NGK6 324 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 LILRB1Q8NHL6 650 aaPredicted RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 DCLRE1CQ96SD1 692 aaKnown RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 UBTD1Q9HAC8 227 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 SLCO1C1Q9NYB5 712 aa18.37■□□□□ 0.53
CASC4-204ENST00000557945 CISD1Q9NZ45 108 aaKnown RBP18.37■□□□□ 0.53
CASC4-204ENST00000557945 DAPL1A0PJW8 107 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 M0R135 149 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 XPNPEP2O43895 674 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 SLC6A9P48067 706 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 UCP2P55851 309 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 ACBD7Q8N6N7 88 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 ZNF283Q8N7M2 679 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 ABHD4Q8TB40 342 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 ZNF799Q96GE5 643 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 KCNJ15Q99712 375 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 MROQ9BYG7 248 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 ELOVL3Q9HB03 270 aa18.36■□□□□ 0.53
CASC4-204ENST00000557945 MRPS18AQ9NVS2 196 aaKnown RBP18.36■□□□□ 0.53
CASC4-204ENST00000557945 IRGMA1A4Y4 181 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 PRR32B1ATL7 298 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 E7EQL1 145 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 MAGEB4O15481 346 aaPredicted RBP18.35■□□□□ 0.53
CASC4-204ENST00000557945 LCKP06239 509 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 ACSM4P0C7M7 580 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 PCSK6P29122 969 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 RAD52P43351 418 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 KRTAP27-1Q3LI81 207 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 UNQ6126/PRO20091Q6UXV3 157 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 RHOUQ7L0Q8 258 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 SSX6Q7RTT6 188 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 ZNF101Q8IZC7 436 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 NUP37Q8NFH4 326 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 SNX33Q8WV41 574 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 OR8B4Q96RC9 309 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 RHNO1Q9BSD3 238 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 CA10Q9NS85 328 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 MYRFQ9Y2G1 1151 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 LRP12Q9Y561 859 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 N6AMT1Q9Y5N5 214 aa18.35■□□□□ 0.53
CASC4-204ENST00000557945 EFCAB10A6NFE3 127 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 J3QRE1 110 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 HS3ST1O14792 307 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 DENRO43583 198 aaKnown RBP18.34■□□□□ 0.53
CASC4-204ENST00000557945 GPRIN2O60269 458 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 SMPD2O60906 423 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 NGFP01138 241 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 THBS4P35443 961 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 NKX6-1P78426 367 aaPredicted RBP18.34■□□□□ 0.53
CASC4-204ENST00000557945 ROM1Q03395 351 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 ZNF85Q03923 595 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 EGR3Q06889 387 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 DRAM2Q6UX65 266 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 RFPL4BQ6ZWI9 263 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 NAA40Q86UY6 237 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 ZNF679Q8IYX0 411 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 OR1J1Q8NGS3 322 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms