RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TXNDC12O95881 172 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 DBHP09172 617 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 PPIAL4FP0DN26 164 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 FPR2P25090 351 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ZFP36P26651 326 aaKnown RBP12.34□□□□□ -0.43
SHMT2-235ENST00000557740 CFPP27918 469 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 CDKN2AP42771 156 aaKnown RBP12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ERFP50548 548 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 SPIBQ01892 262 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 MEP1BQ16820 701 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ARMCX4Q5H9R4 360 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 SLC27A4Q6P1M0 643 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 RNF148Q8N7C7 305 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ATG16L2Q8NAA4 619 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-235ENST00000557740 DHRS1Q96LJ7 313 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 ERMAPQ96PL5 475 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-235ENST00000557740 FAM107BQ9H098 131 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 MYLK2Q9H1R3 596 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
SHMT2-235ENST00000557740 OPN4Q9UHM6 478 aa12.34□□□□□ -0.43
SHMT2-235ENST00000557740 IFNL4K9M1U5 179 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 GADD45GO95257 159 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 GPANK1O95872 356 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 RENP00797 406 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 SLC6A6P31641 620 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 MMP16P51512 607 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 HLXQ14774 488 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 ESCO2Q56NI9 601 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 FBXW12Q6X9E4 464 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 MUC20Q8N307 709 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 GJC3Q8NFK1 279 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 POP5Q969H6 163 aaKnown RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 MCUR1Q96AQ8 359 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 ZNF582Q96NG8 517 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 COQ7Q99807 217 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
SHMT2-235ENST00000557740 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 MAGEL2Q9UJ55 1249 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 LHFPL6Q9Y693 200 aa12.33□□□□□ -0.44
SHMT2-235ENST00000557740 TMEM178BH3BS89 294 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 DCTN6O00399 190 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 OR10H3O60404 316 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 FSHBP01225 129 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 FPR3P25089 353 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 NOS3P29474 1203 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 RBMXP38159 391 aaKnown RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 SRP9P49458 86 aaKnown RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 SLC36A3Q495N2 470 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 CORO6Q6QEF8 472 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 LRRC28Q86X40 367 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 DEFB108BQ8NET1 73 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 OR13G1Q8NGZ3 307 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 PYURFQ96I23 114 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 SIGLEC11Q96RL6 698 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 NMNAT3Q96T66 252 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 GPA33Q99795 319 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 FUZQ9BT04 418 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 IFT27Q9BW83 186 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 GORASP2Q9H8Y8 452 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
SHMT2-235ENST00000557740 AUP1Q9Y679 476 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 TANC2Q9HCD6 1990 aa12.32□□□□□ -0.44
SHMT2-235ENST00000557740 IGLV1-36A0A0B4J1U3 117 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 A8MXK9 166 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 F5H0A9 414 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-235ENST00000557740 FABP3P05413 133 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 HIST1H1CP16403 213 aaKnown RBP12.31□□□□□ -0.44
SHMT2-235ENST00000557740 SELEP16581 610 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 IFNGR2P38484 337 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
SHMT2-235ENST00000557740 HIST1H3AP68431 136 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 COX10Q12887 443 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 ZNF154Q13106 437 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 RFX4Q33E94 735 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 HIST2H3AQ71DI3 136 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 BHLHE23Q8NDY6 225 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 SLC26A10Q8NG04 563 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 OR2AJ1Q8NGZ0 328 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 OR4K13Q8NH42 304 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 ZMYND19Q96E35 227 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-235ENST00000557740 MEGF10Q96KG7 1140 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
SHMT2-235ENST00000557740 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms