RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 KCNJ15Q99712 375 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 C1QTNF6Q9BXI9 259 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 PNRC2Q9NPJ4 139 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 POU2F3Q9UKI9 436 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 EXOGQ9Y2C4 368 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 ABCA12Q86UK0 2595 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 C5orf49A4QMS7 147 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ACOD1A6NK06 481 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 HS3ST1O14792 307 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 SELENOFO60613 162 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 WBP4O75554 376 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 SULT1C4O75897 302 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 CELA3BP08861 270 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 PIPP12273 146 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 COL8A1P27658 744 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 DCKP27707 260 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 NAA10P41227 235 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 CDK5R2Q13319 367 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 MED21Q13503 144 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 TAF13Q15543 124 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 CORO6Q6QEF8 472 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 LYPD4Q6UWN0 246 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 DRAM2Q6UX65 266 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 BCDIN3DQ7Z5W3 292 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 TMEM200AQ86VY9 491 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF679Q8IYX0 411 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF611Q8N823 705 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 OR51G2Q8NGK0 314 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 OR5L1Q8NGL2 311 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 APH1BQ8WW43 257 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 FBXW5Q969U6 566 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 APOBEC3DQ96AK3 386 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 RNFT2Q96EX2 444 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 COPS4Q9BT78 406 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 MROQ9BYG7 248 aa12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 CNOT2Q9NZN8 540 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-208ENST00000557652 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.46
SUPT16H-208ENST00000557652 CRYBG3Q68DQ2 2970 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ARID1AO14497 2285 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 LOC100509620A0A075B734 347 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 EFCAB10A6NFE3 127 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 DENRO43583 198 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 CLIC3O95833 236 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ABHD16AO95870 558 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 GNAO1P09471 354 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 APOBEC3AP31941 199 aaPredicted RBP12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 OPRL1P41146 370 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 EVX1P49640 407 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 UCP2P55851 309 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 MOGQ16653 247 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 C6orf52Q5T4I8 152 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 PLEKHG7Q6ZR37 379 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ACBD7Q8N6N7 88 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 THEM6Q8WUY1 208 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 OPA3Q9H6K4 179 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-208ENST00000557652 J3QRE1 110 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 M0R135 149 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 IGHA1P01876 353 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 RPSAP08865 295 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 BMP4P12644 408 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 HSD11B1P28845 292 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 CALCRP30988 508 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 SELENOVP59797 346 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 ACTA2P62736 377 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 ACTG2P63267 376 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 SNTB2Q13425 540 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF322Q6U7Q0 402 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 COLCA1Q6ZS62 124 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 KBTBD8Q8NFY9 601 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 OR52H1Q8NGJ2 320 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 OR10S1Q8NGN2 331 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 AKAP1Q92667 903 aaKnown RBP eCLIP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF799Q96GE5 643 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 OR8B4Q96RC9 309 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 C1QTNF5Q9BXJ0 243 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 PLEKHF2Q9H8W4 249 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 FGF20Q9NP95 211 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 CA10Q9NS85 328 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms