RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 C7orf69Q9H7B7 122 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 PPIAL4EA0A075B759 164 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 PPIAL4CA0A0B4J2A2 164 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 PPIAL4DF5H284 164 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 RENP00797 406 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 DBHP09172 617 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 SBK2P0C263 348 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 PPIAL4FP0DN26 164 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 SLC6A6P31641 620 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 CENPAP49450 140 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 ERFP50548 548 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 HNRNPA0Q13151 305 aaKnown RBP11.95□□□□□ -0.5
SNX6-210ENST00000557341 FBXW12Q6X9E4 464 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 GJC3Q8NFK1 279 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 APOBEC3DQ96AK3 386 aaPredicted RBP11.95□□□□□ -0.5
SNX6-210ENST00000557341 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 PYURFQ96I23 114 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 TSSK2Q96PF2 358 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 OR2V2Q96R30 315 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 GPA33Q99795 319 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 COQ7Q99807 217 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 SLC6A7Q99884 636 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 OR52D1Q9H346 318 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 PTTG3PQ9NZH4 202 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 LHFPL6Q9Y693 200 aa11.95□□□□□ -0.5
SNX6-210ENST00000557341 IGLV1-36A0A0B4J1U3 117 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 DCTN6O00399 190 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 SNX3O60493 162 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 GPANK1O95872 356 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 SEMG1P04279 462 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 HSD17B1P14061 328 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 FPR3P25089 353 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 MMP16P51512 607 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 COX10Q12887 443 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 MEP1BQ16820 701 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 HIST2H3PS2Q5TEC6 136 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 SLC27A4Q6P1M0 643 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 LEG1Q6P5S2 330 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 HIST2H3AQ71DI3 136 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.94□□□□□ -0.5
SNX6-210ENST00000557341 OR5AS1Q8N127 324 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
SNX6-210ENST00000557341 SLC26A10Q8NG04 563 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 FAM216AQ8WUB2 273 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
SNX6-210ENST00000557341 PATZ1Q9HBE1 687 aaKnown RBP11.94□□□□□ -0.5
SNX6-210ENST00000557341 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
SNX6-210ENST00000557341 A8MXK9 166 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 ARPC3O15145 178 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 OR10H3O60404 316 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 FSHBP01225 129 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 FABP3P05413 133 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 NOS3P29474 1203 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 IFNGR2P38484 337 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 MDH2P40926 338 aaKnown RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 HLXQ14774 488 aaPredicted RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 RFX4Q33E94 735 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 ARMCX4Q5H9R4 360 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 SAMD4BQ5PRF9 694 aaKnown RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 CORO6Q6QEF8 472 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 LRRC28Q86X40 367 aaPredicted RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 OR6V1Q8N148 313 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 ATG16L2Q8NAA4 619 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 OR13G1Q8NGZ3 307 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 POP5Q969H6 163 aaKnown RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 NSMCE2Q96MF7 247 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 ZNF582Q96NG8 517 aaPredicted RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 RPRD1BQ9NQG5 326 aaKnown RBP11.93□□□□□ -0.5
SNX6-210ENST00000557341 B9D1Q9UPM9 204 aa11.93□□□□□ -0.5
SNX6-210ENST00000557341 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 TMEM178BH3BS89 294 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 ARPC2O15144 300 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 FPR2P25090 351 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 CFPP27918 469 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 RRM2P31350 389 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 SLC6A9P48067 706 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 SRP9P49458 86 aaKnown RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 SLC36A3Q495N2 470 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms