RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DBHP09172 617 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ZNF12P17014 697 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 CRABP1P29762 137 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 MDH1P40925 334 aaKnown RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ERFP50548 548 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 FXYD6P3P58550 94 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 PSME3P61289 254 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 HIST1H3AP68431 136 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ZNF154Q13106 437 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ZMYND11Q15326 602 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 HIST2H3PS2Q5TEC6 136 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 FBXW12Q6X9E4 464 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 RBMS3Q6XE24 437 aaKnown RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 PTCHD4Q6ZW05 846 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 HIST2H3AQ71DI3 136 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 GJC3Q8NFK1 279 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 OR8G5Q8NG78 346 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 OR13G1Q8NGZ3 307 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 APOBEC3DQ96AK3 386 aaPredicted RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ZMYND19Q96E35 227 aaPredicted RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 C7orf34Q96L11 122 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 DCAF13Q9NV06 445 aaKnown RBP13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ZNF446Q9NWS9 450 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 ABCD2Q9UBJ2 740 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 INSIG2Q9Y5U4 225 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 GMNNO75496 209 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 CPT2P23786 658 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 CENPAP49450 140 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SEC61A1P61619 476 aaKnown RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 UBA52P62987 128 aaKnown RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SEC23BQ15437 767 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 TUSC1Q2TAM9 212 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 PGM2L1Q6PCE3 622 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SMARCD3Q6STE5 483 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 OR5AS1Q8N127 324 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 MUC20Q8N307 709 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SGMS2Q8NHU3 365 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 CMTM5Q96DZ9 223 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 ZNF582Q96NG8 517 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 GPA33Q99795 319 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SRA1Q9HD15 236 aaKnown RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 PTTG3PQ9NZH4 202 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 SAMD4AQ9UPU9 718 aaKnown RBP13.36□□□□□ -0.27
TUBB3-213ENST00000557262 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
TUBB3-213ENST00000557262 A8MXK9 166 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 F5H0A9 414 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-213ENST00000557262 SPRY1O43609 319 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-213ENST00000557262 DIRAS1O95057 198 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 GPANK1O95872 356 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 WNT2P09544 360 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 EGR1P18146 543 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 SRP9P49458 86 aaKnown RBP13.35□□□□□ -0.27
TUBB3-213ENST00000557262 ESCO2Q56NI9 601 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 ARMCX4Q5H9R4 360 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 DNM1P34Q6PK57 102 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 SIGLECL1Q8N7X8 197 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 DHRS1Q96LJ7 313 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 TSSK2Q96PF2 358 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 ERMAPQ96PL5 475 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-213ENST00000557262 COQ7Q99807 217 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 FUZQ9BT04 418 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 MRI1Q9BV20 369 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 HDHD2Q9H0R4 259 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 TMEM165Q9HC07 324 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 B9D1Q9UPM9 204 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 PPIAL4AQ9Y536 164 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 LHFPL6Q9Y693 200 aa13.35□□□□□ -0.27
TUBB3-213ENST00000557262 DCTN6O00399 190 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 MMP16P51512 607 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 SMIM11AP58511 58 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 MEP1BQ16820 701 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 RSPO1Q2MKA7 263 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-213ENST00000557262 RFX4Q33E94 735 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 AWAT1Q58HT5 328 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-213ENST00000557262 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 MEGF10Q96KG7 1140 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 MYLK2Q9H1R3 596 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 GORASP2Q9H8Y8 452 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 SPAG4Q9NPE6 437 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 ADA2Q9NZK5 511 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 ZNF69Q9UC07 566 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 LRCH1Q9Y2L9 728 aa13.34□□□□□ -0.27
TUBB3-213ENST00000557262 IGLV1-36A0A0B4J1U3 117 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 CEACAM18A8MTB9 384 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 H0YL77 283 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 ARPC3O15145 178 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 GADD45GO95257 159 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 PPP1R3DO95685 299 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms