RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DHRS1Q96LJ7 313 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 ERMAPQ96PL5 475 aaPredicted RBP19.05■□□□□ 0.64
ACTN1-220ENST00000556433 RBM4Q9BWF3 364 aaKnown RBP19.05■□□□□ 0.64
ACTN1-220ENST00000556433 PATZ1Q9HBE1 687 aaKnown RBP19.05■□□□□ 0.64
ACTN1-220ENST00000556433 SRA1Q9HD15 236 aaKnown RBP19.05■□□□□ 0.64
ACTN1-220ENST00000556433 PTTG3PQ9NZH4 202 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 PPIAL4EA0A075B759 164 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 PPIAL4CA0A0B4J2A2 164 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 PPIAL4DF5H284 164 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 PPP1R3DO95685 299 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 PPIAL4FP0DN26 164 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 FPR2P25090 351 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 CRABP1P29762 137 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 PRDX6P30041 224 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 HLXQ14774 488 aaPredicted RBP19.04■□□□□ 0.64
ACTN1-220ENST00000556433 OR2T2Q6IF00 324 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 DNM1P34Q6PK57 102 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 GJC3Q8NFK1 279 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 OR2V2Q96R30 315 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 FUZQ9BT04 418 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 MMP26Q9NRE1 261 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 ATPIF1Q9UII2 106 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 V9GYQ6 96 aa19.04■□□□□ 0.64
ACTN1-220ENST00000556433 TANC2Q9HCD6 1990 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 TMEM89A2RUT3 159 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 J3QW42 95 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 DCTN6O00399 190 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 SLC6A9P48067 706 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 SMIM11AP58511 58 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 BTG1P62324 171 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 ZMYND11Q15326 602 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 MEP1BQ16820 701 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 RFX4Q33E94 735 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 SLC27A4Q6P1M0 643 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 PGM2L1Q6PCE3 622 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 C22orf15Q8WYQ4 148 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 APOBEC3DQ96AK3 386 aaPredicted RBP19.03■□□□□ 0.64
ACTN1-220ENST00000556433 PYURFQ96I23 114 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 SIGLEC11Q96RL6 698 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 GORASP2Q9H8Y8 452 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 B9D1Q9UPM9 204 aa19.03■□□□□ 0.64
ACTN1-220ENST00000556433 TRAPPC2LH3BP13 241 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 FSHBP01225 129 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 COMPP49747 757 aaPredicted RBP19.02■□□□□ 0.64
ACTN1-220ENST00000556433 HIST1H3AP68431 136 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 HIST2H3PS2Q5TEC6 136 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 LEG1Q6P5S2 330 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 CORO6Q6QEF8 472 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 FBXW12Q6X9E4 464 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 HIST2H3AQ71DI3 136 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 JAZF1Q86VZ6 243 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 OR8G5Q8NG78 346 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 OR13G1Q8NGZ3 307 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 ZNF582Q96NG8 517 aaPredicted RBP19.02■□□□□ 0.64
ACTN1-220ENST00000556433 COQ7Q99807 217 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 HDHD2Q9H0R4 259 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 GCM1Q9NP62 436 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 LHFPL6Q9Y693 200 aa19.02■□□□□ 0.64
ACTN1-220ENST00000556433 IGLV1-36A0A0B4J1U3 117 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 TMEM178BH3BS89 294 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 GADD45GO95257 159 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 RENP00797 406 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 SLC6A6P31641 620 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 SEC61A1P61619 476 aaKnown RBP19.01■□□□□ 0.63
ACTN1-220ENST00000556433 SPIBQ01892 262 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 OR6V1Q8N148 313 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 C3orf56Q8N813 242 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 DEFB108BQ8NET1 73 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 FANK1Q8TC84 345 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 NMNAT3Q96T66 252 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 FAM107BQ9H098 131 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 OR52D1Q9H346 318 aa19.01■□□□□ 0.63
ACTN1-220ENST00000556433 POLR3KQ9Y2Y1 108 aaPredicted RBP19.01■□□□□ 0.63
ACTN1-220ENST00000556433 MDH2P40926 338 aaKnown RBP19■□□□□ 0.63
ACTN1-220ENST00000556433 MMP16P51512 607 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 DBPQ10586 325 aaPredicted RBP19■□□□□ 0.63
ACTN1-220ENST00000556433 ZNF154Q13106 437 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 ZDHHC22Q8N966 263 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 OR10AD1Q8NGE0 317 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 OR4K13Q8NH42 304 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 ZNF420Q8TAQ5 688 aaPredicted RBP19■□□□□ 0.63
ACTN1-220ENST00000556433 POP5Q969H6 163 aaKnown RBP19■□□□□ 0.63
ACTN1-220ENST00000556433 MEGF10Q96KG7 1140 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 IFT27Q9BW83 186 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 NTN4Q9HB63 628 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 ESM1Q9NQ30 184 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 AUP1Q9Y679 476 aa19■□□□□ 0.63
ACTN1-220ENST00000556433 H0YL77 283 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 IFNL4K9M1U5 179 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 ARPC3O15145 178 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 OR10H3O60404 316 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 SEMG1P04279 462 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 HIST1H1CP16403 213 aaKnown RBP18.99■□□□□ 0.63
ACTN1-220ENST00000556433 ZNF12P17014 697 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 SRP9P49458 86 aaKnown RBP18.99■□□□□ 0.63
ACTN1-220ENST00000556433 COX10Q12887 443 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 RSPO1Q2MKA7 263 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-220ENST00000556433 MUC20Q8N307 709 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-220ENST00000556433 DVL3Q92997 716 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-220ENST00000556433 MCUR1Q96AQ8 359 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms