RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 HLA-HP01893 362 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 SERPINA5P05154 406 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CD1AP06126 327 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 MMP7P09237 267 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CPEP16870 476 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CELP19835 753 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ALDH3B2P48448 385 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CX3CR1P49238 355 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 RGS6P49758 472 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 MMP16P51512 607 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CCR9P51686 369 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 FOXG1P55316 489 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 GALK2Q01415 458 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 TPBGQ13641 420 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ALKBH1Q13686 389 aaKnown RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 PPA1Q15181 289 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 TBC1D28Q2M2D7 210 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 C3orf36Q3SXR2 165 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 FBXL19-AS1Q494R0 122 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 SOWAHCQ53LP3 525 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF684Q5T5D7 378 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 BCL2L15Q5TBC7 163 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 OTPQ5XKR4 325 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 XAF1Q6GPH4 301 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF774Q6NX45 483 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 DRAM2Q6UX65 266 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 PAMR1Q6UXH9 720 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 STAC2Q6ZMT1 411 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF704Q6ZNC4 412 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CFAP77Q6ZQR2 320 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 SSX6Q7RTT6 188 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 LIX1LQ8IVB5 337 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF808Q8N4W9 903 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 MS4A15Q8N5U1 240 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CCDC54Q8NEL0 328 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 AKR7LQ8NHP1 331 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 HTRA1Q92743 480 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 THRSPQ92748 146 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 PELI1Q96FA3 418 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 CCDC120Q96HB5 630 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 BBC3Q96PG8 261 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 OR5M11Q96RB7 305 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 KCNS3Q9BQ31 491 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 TTTY10Q9BZA0 68 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 ACTR6Q9GZN1 396 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 WNT5BQ9H1J7 359 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 OR10A2Q9H208 303 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 DDX28Q9NUL7 540 aaKnown RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 B3GNT2Q9NY97 397 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 GTF2A1LQ9UNN4 478 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 KLHDC2Q9Y2U9 406 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 LSM2Q9Y333 95 aaKnown RBP8.05□□□□□ -1.12
ACTN1-218ENST00000556343 SPEF1Q9Y4P9 236 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 LRP12Q9Y561 859 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 DOCK7Q96N67 2140 aa8.05□□□□□ -1.12
ACTN1-218ENST00000556343 NBEAQ8NFP9 2946 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 SMIM31A0A1B0GVY4 71 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 CCDC160A6NGH7 325 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 TMEM212A6NML5 194 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 FAM90A27PA6NNH2 459 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 M0R135 149 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OGG1O15527 345 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PLPP2O43688 288 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 HLA-DPB1P04440 258 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ANXA2P07355 339 aaKnown RBP8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PATE4P0C8F1 98 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 CD36P16671 472 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF12P17014 697 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 CCNOP22674 350 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 STOMP27105 288 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 UGT2B10P36537 528 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 SLC6A9P48067 706 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PRKXP51817 358 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ADORA2A-AS1P86434 159 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 FAM27E3Q08E93 113 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 RAB39AQ14964 217 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 CDK5R1Q15078 307 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 TMEM244Q5VVB8 128 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 LIPKQ5VXJ0 399 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 GDPGP1Q6ZNW5 385 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 NCCRP1Q6ZVX7 275 aaPredicted RBP8.04□□□□□ -1.12
ACTN1-218ENST00000556343 MDP1Q86V88 176 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 C1orf174Q8IYL3 243 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF676Q8N7Q3 588 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 RELL2Q8NC24 303 aaPredicted RBP8.04□□□□□ -1.12
ACTN1-218ENST00000556343 SLC30A7Q8NEW0 376 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OR52H1Q8NGJ2 320 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OR5L1Q8NGL2 311 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OR13F1Q8NGS4 319 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ITFG2Q969R8 447 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 S100PBPQ96BU1 408 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF799Q96GE5 643 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PGAM5Q96HS1 289 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OPALINQ96PE5 141 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 AMELYQ99218 206 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms