RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DCPSQ96C86 337 aaKnown RBP1.46□□□□□ -2.18
SCFD1-216ENST00000555550 OR5B12Q96R08 314 aa1.46□□□□□ -2.18
SCFD1-216ENST00000555550 NUP50Q9UKX7 468 aa1.46□□□□□ -2.18
SCFD1-216ENST00000555550 IGLV1-36A0A0B4J1U3 117 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 A0A1W2PPE3 182 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 OR5H1A6NKK0 313 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 NDUFC2-KCTD14E9PQ53 114 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 NVLO15381 856 aaKnown RBP1.45□□□□□ -2.18
SCFD1-216ENST00000555550 CHMP2AO43633 222 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 GUCA1CO95843 209 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 ERGP11308 486 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 CD99P14209 185 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 GGT1P19440 569 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 IDH2P48735 452 aaKnown RBP1.45□□□□□ -2.18
SCFD1-216ENST00000555550 AIF1P55008 147 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 DMC1Q14565 340 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 DEFB134Q4QY38 66 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 C6orf226Q5I0X4 101 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 CSGALNACT2Q8N6G5 542 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 SLC35G3Q8N808 338 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 OR5T1Q8NG75 326 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 OR2A1Q8NGT9 310 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 OR5B3Q8NH48 314 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 SLC41A3Q96GZ6 507 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 RHBDL2Q9NX52 303 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 PALLDQ8WX93 1383 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 TRIP11Q15643 1979 aa1.45□□□□□ -2.18
SCFD1-216ENST00000555550 TICRRQ7Z2Z1 1910 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 OR52A4PA6NMU1 304 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 LRRIQ3A6PVS8 624 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 KRBOX1C9JBD0 128 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 MFNGO00587 321 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 PLXNB1O43157 2135 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 EIF4E2O60573 245 aaKnown RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 ASGR1P07306 291 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 DESP17661 470 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 GPX4P36969 197 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 IFNAR2P48551 515 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 TPMTP51580 245 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 CCNHP51946 323 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 RPL23P62829 140 aaKnown RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 ADARB1P78563 741 aaKnown RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 MAD2L1BPQ15013 274 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 OR7A5Q15622 319 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 GPR107Q5VW38 600 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 MED27Q6P2C8 311 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 OR10AD1Q8NGE0 317 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 CCDC126Q96EE4 140 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 STACQ99469 402 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 SEC22CQ9BRL7 303 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 CHCHD7Q9BUK0 85 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 ROPN1BQ9BZX4 212 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-216ENST00000555550 TMEM9BQ9NQ34 198 aa1.44□□□□□ -2.18
SCFD1-216ENST00000555550 ZSWIM8A7E2V4 1837 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 J3QKU1 62 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 PLIN3O60664 434 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 CLPXO76031 633 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 LHBP01229 141 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 CHMLP26374 656 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 TGFBR2P37173 567 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 MPV17P39210 176 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 GALR1P47211 349 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 FAM53BQ14153 422 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 RBMY1FQ15415 496 aaKnown RBP1.43□□□□□ -2.18
SCFD1-216ENST00000555550 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 KDELC1Q6UW63 502 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 USP50Q70EL3 339 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-216ENST00000555550 CDR2LQ86X02 465 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-216ENST00000555550 OR11H7Q8NGC8 314 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 RSPH1Q8WYR4 309 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 HGDQ93099 445 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 ZFP3Q96NJ6 502 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 KLF6Q99612 283 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-216ENST00000555550 LZTS2Q9BRK4 669 aa1.43□□□□□ -2.18
SCFD1-216ENST00000555550 IGHV3-72A0A0B4J1Y9 119 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 GLSO94925 669 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-216ENST00000555550 IL1BP01584 269 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 SERPINA5P05154 406 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 PFN1P07737 140 aaKnown RBP1.42□□□□□ -2.18
SCFD1-216ENST00000555550 MCF2P10911 925 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 RBM34P42696 430 aaKnown RBP1.42□□□□□ -2.18
SCFD1-216ENST00000555550 CRYBB2P43320 205 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 GZMMP51124 257 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 GFERP55789 205 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 CYP24A1Q07973 514 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 LRRC23Q53EV4 343 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-216ENST00000555550 KLHL12Q53G59 568 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 CTSL3PQ5NE16 218 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 H3F3CQ6NXT2 135 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 PRSS54Q6PEW0 395 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 TMEM150AQ86TG1 271 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 TEX9Q8N6V9 391 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 CHST4Q8NCG5 386 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 BHLHE23Q8NDY6 225 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 B3GNT7Q8NFL0 401 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 TMEM230Q96A57 120 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 ATP5SQ99766 215 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 MARVELD1Q9BSK0 173 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 CSNK1G1Q9HCP0 422 aa1.42□□□□□ -2.18
SCFD1-216ENST00000555550 FGF20Q9NP95 211 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms