RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TSGA13Q96PP4 275 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 STACQ99469 402 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 RBBP8Q99708 897 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 MICU1Q9BPX6 476 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 MARVELD1Q9BSK0 173 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 GCOM2Q9BZD3 368 aaPredicted RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 NIPAL2Q9H841 368 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NT5MQ9NPB1 228 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 C21orf62Q9NYP8 219 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 MTFP1Q9UDX5 166 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ZNF639Q9UID6 485 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NUP50Q9UKX7 468 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 BAHCC1Q9P281 2608 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 IGLV1-36A0A0B4J1U3 117 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 A0A0U1RQV1 116 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 ZNF98A6NK75 572 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 OR52A4PA6NMU1 304 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 LRRIQ3A6PVS8 624 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 CEACAM18A8MTB9 384 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 BTNL10A8MVZ5 291 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 H7C1H1 209 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 AIM2O14862 343 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 RAB29O14966 203 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 MRPS12O15235 138 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 CDC40O60508 579 aaKnown RBP eCLIP0.73□□□□□ -2.29
SRP54-207ENST00000555535 CLPXO76031 633 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 IGLV6-57P01721 117 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 PRB1P04280 392 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 CCNB1P14635 433 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 IL1RNP18510 177 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 NCF2P19878 526 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 MX1P20591 662 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 ME2P23368 584 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 WARSP23381 471 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 TAGLN2P37802 199 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 VHLP40337 213 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 TMED10P49755 219 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 HNMTP50135 292 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 CCNHP51946 323 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 GBX2P52951 348 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 TAS2R46P59540 309 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 EIF3EP60228 445 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 ACTR1AP61163 376 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 RPS23P62266 143 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 CRADDP78560 199 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 FUT5Q11128 374 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 IL24Q13007 206 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 MRPL23Q16540 153 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 VPS26BQ4G0F5 336 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 LRRC23Q53EV4 343 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 TCEAL5Q5H9L2 206 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 STUMQ69YW2 141 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 RNASEKQ6P5S7 137 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 MRPL55Q7Z7F7 128 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 CDKL3Q8IVW4 592 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 SGPP2Q8IWX5 399 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 CSGALNACT2Q8N6G5 542 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 COX18Q8N8Q8 333 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 PRELID2Q8N945 189 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 B3GNT7Q8NFL0 401 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 STEAP2Q8NFT2 490 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 OR6N1Q8NGY5 312 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 OR51E1Q8TCB6 317 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 C17orf50Q8WW18 174 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 RSPH1Q8WYR4 309 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 TCEAL3Q969E4 200 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 DYNLL2Q96FJ2 89 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 SLC41A3Q96GZ6 507 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 DNAJC1Q96KC8 554 aaKnown RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 ZNF317Q96PQ6 595 aaPredicted RBP0.73□□□□□ -2.29
SRP54-207ENST00000555535 RHOXF2Q9BQY4 288 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 SLC39A3Q9BRY0 314 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 GGTLC1Q9BX51 225 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 HYPKQ9NX55 129 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 PTTG3PQ9NZH4 202 aa0.73□□□□□ -2.29
SRP54-207ENST00000555535 IGHV1OR15-9A0A0B4J2B8 117 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 IGKV1-8A0A0C4DH67 115 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 TMEM120BA0PK00 339 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 BICDL2A1A5D9 508 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 SYCE1LA8MT33 242 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 MANBAO00462 879 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 PLPP1O14494 284 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 BPY2O14599 106 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 FKBP6O75344 327 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 SERPINB7O75635 380 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 TSPAN13O95857 204 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 PTMAP06454 111 aaKnown RBP0.72□□□□□ -2.29
SRP54-207ENST00000555535 CD28P10747 220 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 MCF2P10911 925 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 ZNF24P17028 368 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 RAB3AP20336 220 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 TALDO1P37837 337 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 TNFSF9P41273 254 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 RBM34P42696 430 aaKnown RBP0.72□□□□□ -2.29
SRP54-207ENST00000555535 NSG1P42857 185 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 ARFIP1P53367 373 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 PLP1P60201 277 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 PPP1CBP62140 327 aa0.72□□□□□ -2.29
SRP54-207ENST00000555535 RPL23P62829 140 aaKnown RBP0.72□□□□□ -2.29
SRP54-207ENST00000555535 CHIT1Q13231 466 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms