RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 MYOZ1Q9NP98 299 aaPredicted RBP11.65□□□□□ -0.54
SNX6-203ENST00000555416 TBCCD1Q9NVR7 557 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 SLCO1C1Q9NYB5 712 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 KLHL21Q9UJP4 597 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 CACNG2Q9Y698 323 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 ANK3Q12955 4377 aaKnown RBP11.64□□□□□ -0.55
SNX6-203ENST00000555416 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 CDC14BO60729 498 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 LILRA1O75019 489 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 E2F6O75461 281 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 IGHV1-46P01743 117 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 SPI1P17947 270 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 POU1F1P28069 291 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 GCH1P30793 250 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 PRSS12P56730 875 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 GK3PQ14409 553 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 HLXQ14774 488 aaPredicted RBP11.64□□□□□ -0.55
SNX6-203ENST00000555416 TSTQ16762 297 aaKnown RBP11.64□□□□□ -0.55
SNX6-203ENST00000555416 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 TMEM236Q5W0B7 351 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 Q6ZR03 302 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 GJC3Q8NFK1 279 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 OR2T4Q8NH00 348 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 PTP4A1Q93096 173 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 MSL2Q9HCI7 577 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 YAE1D1Q9NRH1 226 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 ZNF275Q9NSD4 429 aaPredicted RBP11.64□□□□□ -0.55
SNX6-203ENST00000555416 BAIAP2Q9UQB8 552 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 COMMD3-BMI1R4GMX3 469 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
SNX6-203ENST00000555416 H3BN98 237 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 SPRY3O43610 288 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ATP5HO75947 161 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ACSM4P0C7M7 580 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
SNX6-203ENST00000555416 ZNF23P17027 643 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 GRK5P34947 590 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ZNF81P51508 661 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ARHGDIAP52565 204 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 SLC25A1P53007 311 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 GINS1Q14691 196 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 C1orf146Q5VVC0 180 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 SHQ1Q6PI26 577 aaKnown RBP11.63□□□□□ -0.55
SNX6-203ENST00000555416 COLCA1Q6ZS62 124 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 TEX47Q8TBZ9 253 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 SNX33Q8WV41 574 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 RDH5Q92781 318 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 PITX2Q99697 317 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 COQ7Q99807 217 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 HDHD2Q9H0R4 259 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 PTTG3PQ9NZH4 202 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 ATPIF1Q9UII2 106 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 PURGQ9UJV8 347 aaKnown RBP11.63□□□□□ -0.55
SNX6-203ENST00000555416 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
SNX6-203ENST00000555416 RIIAD1A6NNX1 92 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 H3BSA7 217 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 MITFO75030 526 aaPredicted RBP11.62□□□□□ -0.55
SNX6-203ENST00000555416 TACSTD2P09758 323 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 OSMP13725 252 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 HOXB6P17509 224 aaKnown RBP11.62□□□□□ -0.55
SNX6-203ENST00000555416 RASSF2P50749 326 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 DAPP51397 102 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 CDK5Q00535 292 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 PCK2Q16822 640 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 C6orf52Q5T4I8 152 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 FAHD1Q6P587 224 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 ARL9Q6T311 187 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 USP51Q70EK9 711 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 AMIGO2Q86SJ2 522 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 OR2AJ1Q8NGZ0 328 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 HAVCR1Q96D42 359 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 MSI2Q96DH6 328 aaKnown RBP11.62□□□□□ -0.55
SNX6-203ENST00000555416 CDADC1Q9BWV3 514 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 NARFLQ9H6Q4 476 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 CHODLQ9H9P2 273 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 NKIRAS2Q9NYR9 191 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 TREM2Q9NZC2 230 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 GPR160Q9UJ42 338 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
SNX6-203ENST00000555416 F5H5K5 113 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 ZNF593O00488 134 aaPredicted RBP11.61□□□□□ -0.55
SNX6-203ENST00000555416 SURF4O15260 269 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
SNX6-203ENST00000555416 DEAF1O75398 565 aaPredicted RBP11.61□□□□□ -0.55
SNX6-203ENST00000555416 ANXA8P13928 327 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 ZNF823P16415 610 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 KITLGP21583 273 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 ACHEP22303 614 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 UNQ6126/PRO20091Q6UXV3 157 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 DCXRQ7Z4W1 244 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 C1orf174Q8IYL3 243 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 OR5AS1Q8N127 324 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms