RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PTTG1O95997 202 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 PAHP00439 452 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 ZNF823P16415 610 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 POU3F2P20265 443 aaPredicted RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 MAPK3P27361 379 aaPredicted RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 CBX5P45973 191 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 TNFSF10P50591 281 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 GALK2Q01415 458 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 GDPD3Q7L5L3 318 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 OR4M1Q8NGD0 313 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 GRPEL2Q8TAA5 225 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SETD6Q8TBK2 473 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 TRMT10AQ8TBZ6 339 aaKnown RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 GPR148Q8TDV2 347 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 ROBO4Q8WZ75 1007 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 HTRA1Q92743 480 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SLC25A28Q96A46 364 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SLC6A15Q9H2J7 730 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 DIABLOQ9NR28 239 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 ABCB10Q9NRK6 738 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 C14orf119Q9NWQ9 140 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 SPATA2Q9UM82 520 aa7.85□□□□□ -1.15
TDP1-210ENST00000554976 AK6Q9Y3D8 172 aaKnown RBP7.85□□□□□ -1.15
TDP1-210ENST00000554976 LOC390937A0A1W2PQ73 354 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 RGS5O15539 181 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 SLC43A1O75387 559 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 RFC3P40938 356 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 CSNK1A1P48729 337 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 RRADP55042 308 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ASAH1Q13510 395 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.84□□□□□ -1.15
TDP1-210ENST00000554976 DIRAS2Q96HU8 199 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ZNF416Q9BWM5 594 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 COMMD4Q9H0A8 199 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 C1orf198Q9H425 327 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 OR52A1Q9UKL2 312 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 FOXJ3Q9UPW0 622 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 WASF3Q9UPY6 502 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 FABP12A6NFH5 140 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ZNF726A6NNF4 738 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ZNF878C9JN71 531 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 NPIPA2E9PIF3 369 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 NPIPA3F8WFD2 350 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 PLA2G10O15496 165 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 LMX1BO60663 402 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ITGB2P05107 769 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ADRB1P08588 477 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ACHEP22303 614 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 NOVA1P51513 510 aaKnown RBP7.84□□□□□ -1.15
TDP1-210ENST00000554976 NKX2-5P52952 324 aaPredicted RBP7.84□□□□□ -1.15
TDP1-210ENST00000554976 AP2S1P53680 142 aaPredicted RBP7.84□□□□□ -1.15
TDP1-210ENST00000554976 FAM131AQ6UXB0 335 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 DNM1P46Q6ZS02 220 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 GALNTL5Q7Z4T8 443 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 BIVMQ86UB2 503 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 FDCSPQ8NFU4 85 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 CEP19Q96LK0 163 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 SCPEP1Q9HB40 452 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 ZNF319Q9P2F9 582 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 SPRR3Q9UBC9 169 aa7.84□□□□□ -1.15
TDP1-210ENST00000554976 FAM166BA8MTA8 275 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 PDCD5O14737 125 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 DHHO43323 396 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.16
TDP1-210ENST00000554976 SNRPBP14678 240 aaKnown RBP7.84□□□□□ -1.16
TDP1-210ENST00000554976 MSR1P21757 451 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 PSMA6P60900 246 aaKnown RBP7.84□□□□□ -1.16
TDP1-210ENST00000554976 MRPS34P82930 218 aaKnown RBP7.84□□□□□ -1.16
TDP1-210ENST00000554976 FAM27BQ5VT28 67 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 ZNF627Q7L945 461 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 FAM109AQ8N4B1 249 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 TMEM106AQ96A25 262 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 FBXO17Q96EF6 278 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 BCO1Q9HAY6 547 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 B4GALT7Q9UBV7 327 aa7.84□□□□□ -1.16
TDP1-210ENST00000554976 NUFIP1Q9UHK0 495 aaKnown RBP7.84□□□□□ -1.16
TDP1-210ENST00000554976 FRYQ5TBA9 3013 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 MED12Q93074 2177 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 LOC107986453A0A1B0GWG9 222 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 A0A1W2PQ09 198 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 BET1O15155 118 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 RER1O15258 196 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 TRAPPC6AO75865 159 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 IGHG3P01860 377 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 ACSM4P0C7M7 580 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 CALCBP10092 127 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 NR2C1P13056 603 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 CRYGSP22914 178 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 MNDAP41218 407 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 SCAND1P57086 179 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 TOMM20Q15388 145 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 ZNF766Q5HY98 468 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 UBE2NLQ5JXB2 153 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 RIPPLY2Q5TAB7 128 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 CRIP3Q6Q6R5 217 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 FCRLAQ7L513 359 aa7.83□□□□□ -1.16
TDP1-210ENST00000554976 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.83□□□□□ -1.16
TDP1-210ENST00000554976 ADGRE4PQ86SQ3 457 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms