RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 MALT1Q9UDY8 824 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 CAMK2AQ9UQM7 478 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 CR1P17927 2039 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TMED7-TICAM2A0A0A6YYA0 188 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 NAP1L6A6NFF2 107 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 FIGNL2A6NMB9 653 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ACOT7O00154 380 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 RGS13O14921 159 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 PLA2G10O15496 165 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 OIP5O43482 229 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SULT1B1O43704 296 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 GSTZ1O43708 216 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SSX4O60224 188 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SUSD5O60279 629 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 FZD7O75084 574 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF254O75437 659 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 DHFRP00374 187 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 IGHG3P01860 377 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 EIF4EP06730 217 aaKnown RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 CCL3P10147 92 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 EPXP11678 715 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MNDAP41218 407 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 DNASE1L1P49184 302 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 DAP3P51398 398 aaKnown RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MMP15P51511 669 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 RPL27P61353 136 aaKnown RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 EGR4Q05215 589 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 C17orf67Q0P5P2 114 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 POU4F3Q15319 338 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 P2RY14Q15391 338 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TBRG1Q3YBR2 411 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MESTQ5EB52 335 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ATAD3CQ5T2N8 411 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF684Q5T5D7 378 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 PRAMEF20Q5VT98 475 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SLC22A10Q63ZE4 541 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 KCTD18Q6PI47 426 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 CBLN3Q6UW01 205 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TIGD4Q8IY51 512 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TCTE3Q8IZS6 198 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 LRRC17Q8N6Y2 441 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 YIPF7Q8N8F6 280 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 OR2M7Q8NG81 312 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 OR6N2Q8NGY6 317 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 OR5AK2Q8NH90 309 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SPACA9Q96E40 222 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF486Q96H40 463 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SGCZQ96LD1 299 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ADAD1Q96M93 576 aaKnown RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MOGAT1Q96PD6 335 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TSPAN32Q96QS1 320 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MARVELD1Q9BSK0 173 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TTTY12Q9BZ98 90 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TXNIPQ9H3M7 391 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TCF7L1Q9HCS4 588 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 BRD7Q9NPI1 651 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 B3GAT2Q9NPZ5 323 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 SDHAF3Q9NRP4 125 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 BEX4Q9NWD9 120 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 ING3Q9NXR8 418 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 MRPL39Q9NYK5 338 aaKnown RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 PTTG3PQ9NZH4 202 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 IKZF2Q9UKS7 526 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 TMED7Q9Y3B3 224 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 NUBP2Q9Y5Y2 271 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 CACNG2Q9Y698 323 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 RAI1Q7Z5J4 1906 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-216ENST00000554975 PCNX3Q9H6A9 2034 aa9.85□□□□□ -0.83
SHMT2-216ENST00000554975 USF3Q68DE3 2245 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 A0A0G2JMP0 313 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 TRBV5-5A0A0J9YX44 114 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 A0A0X1KG70 313 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 RNF212BA8MTL3 300 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 SCO2O43819 266 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 FADS1O60427 444 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 NPIPB7O75200 414 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 GLSO94925 669 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-216ENST00000554975 CNR1P21554 472 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 CFPP27918 469 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 APOBEC1P41238 236 aaKnown RBP9.84□□□□□ -0.83
SHMT2-216ENST00000554975 CDKN2AP42771 156 aaKnown RBP9.84□□□□□ -0.83
SHMT2-216ENST00000554975 MAGEA5P43359 124 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 CAPZA1P52907 286 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 DYRK1AQ13627 763 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 INSL4Q14641 139 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 KCNJ8Q15842 424 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 TATDN3Q17R31 274 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 RIPPLY2Q5TAB7 128 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 C1orf140Q5VVS0 124 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 SLC18B1Q6NT16 456 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 FDX2Q6P4F2 183 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 POMZP3Q6PJE2 187 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 SPATC1Q76KD6 591 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 PRR22Q8IZ63 422 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 TMEM251Q8N6I4 163 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 OR4M2Q8NGB6 313 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 LINC01560Q8TB33 94 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 GPR148Q8TDV2 347 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 SMIM4Q8WVI0 70 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms