RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SLC2A5P22732 501 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 IGFBP5P24593 272 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 RBMXP38159 391 aaKnown RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 RAD52P43351 418 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 PPOXP50336 477 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 NUDT6P53370 316 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SNAPC1Q16533 368 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SPATC1Q76KD6 591 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 GJC3Q8NFK1 279 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SYNPRQ8TBG9 265 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 KLF14Q8TD94 323 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 DNAJC9Q8WXX5 260 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 RAB3IPQ96QF0 476 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 PITX2Q99697 317 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 WACQ9BTA9 647 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 OSBPL10Q9BXB5 764 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 BCL2L14Q9BZR8 327 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 KCNG2Q9UJ96 466 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 KLHDC2Q9Y2U9 406 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 FLNAP21333 2647 aaKnown RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 A0A096LNT2 108 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 PRR23D1E9PI22 279 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 M0R233 179 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 EI24O14681 340 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 NCR1O76036 304 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 GLCEO94923 617 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 F12P00748 615 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 HMGN1P05114 100 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 PRR23D2P0DMB1 279 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ZNF823P16415 610 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 GSTT1P30711 240 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 FMO3P31513 532 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ENTPD1P49961 510 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 EFNA4P52798 201 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 KLF3P57682 345 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ESRRGP62508 458 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 EFNB1P98172 346 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 HLXQ14774 488 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 PCK2Q16822 640 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 KLHL12Q53G59 568 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 SLX4IPQ5VYV7 408 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 C12orf73Q69YU5 71 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ZFP1Q6P2D0 407 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 CXXC5Q7LFL8 322 aaKnown RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 DCXRQ7Z4W1 244 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ERI1Q8IV48 349 aaKnown RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 TIGD4Q8IY51 512 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 ST7LQ8TDW4 575 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 COX4I2Q96KJ9 171 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 COQ7Q99807 217 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 SLC29A1Q99808 456 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 CDADC1Q9BWV3 514 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 HDHD2Q9H0R4 259 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 RIBC2Q9H4K1 309 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 MARCH7Q9H992 704 aa10.56□□□□□ -0.72
SYNE2-214ENST00000554928 EIF3KQ9UBQ5 218 aaKnown RBP10.56□□□□□ -0.72
SYNE2-214ENST00000554928 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 F5H5K5 113 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 IGHV3-13P01766 116 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 HPXP02790 462 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 ALPLP05186 524 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 ACSM4P0C7M7 580 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 NAA10P41227 235 aaPredicted RBP10.55□□□□□ -0.72
SYNE2-214ENST00000554928 MAGEB1P43366 347 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 EVX1P49640 407 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 HCCSP53701 268 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 PSG7Q13046 419 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 APOFQ13790 326 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 NKPD1Q17RQ9 610 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 MBNL2Q5VZF2 373 aaKnown RBP10.55□□□□□ -0.72
SYNE2-214ENST00000554928 DPY19L4Q7Z388 723 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 CBR4Q8N4T8 237 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 OR6N2Q8NGY6 317 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 OR2AJ1Q8NGZ0 328 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 IL4I1Q96RQ9 567 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 ATF6BQ99941 703 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 GABARAPL3Q9BY60 117 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 BARX1Q9HBU1 254 aaPredicted RBP10.55□□□□□ -0.72
SYNE2-214ENST00000554928 TBCCD1Q9NVR7 557 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 PTTG3PQ9NZH4 202 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 ATPIF1Q9UII2 106 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 MED13LQ71F56 2210 aa10.55□□□□□ -0.72
SYNE2-214ENST00000554928 ZSCAN5BA6NJL1 495 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 PRR32B1ATL7 298 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 C3orf80F5H4A9 247 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 TLX2O43763 284 aaPredicted RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 LILRA1O75019 489 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 MRPL3P09001 348 aaKnown RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 SLC2A1P11166 492 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 BMP4P12644 408 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 PAICSP22234 425 aaKnown RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 MMP15P51511 669 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 EIF2B1Q14232 305 aaKnown RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 CARTPTQ16568 116 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 ZSCAN26Q16670 478 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms