RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 OTPQ5XKR4 325 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 GLYATQ6IB77 296 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 SMARCD3Q6STE5 483 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 FBXW12Q6X9E4 464 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 PTCHD4Q6ZW05 846 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 OR5AS1Q8N127 324 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 MUC20Q8N307 709 aaPredicted RBP15.8■□□□□ 0.12
CPSF2-203ENST00000554290 DEFB108BQ8NET1 73 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 OR8G5Q8NG78 346 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 OR13G1Q8NGZ3 307 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 C22orf15Q8WYQ4 148 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 APOBEC3DQ96AK3 386 aaPredicted RBP15.8■□□□□ 0.12
CPSF2-203ENST00000554290 C7orf34Q96L11 122 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 ZNF582Q96NG8 517 aaPredicted RBP15.8■□□□□ 0.12
CPSF2-203ENST00000554290 MRI1Q9BV20 369 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 HDHD2Q9H0R4 259 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 SPAG4Q9NPE6 437 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 MMP26Q9NRE1 261 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 DCAF13Q9NV06 445 aaKnown RBP15.8■□□□□ 0.12
CPSF2-203ENST00000554290 ZNF446Q9NWS9 450 aa15.8■□□□□ 0.12
CPSF2-203ENST00000554290 TENM1Q9UKZ4 2725 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 TANC2Q9HCD6 1990 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 TRBV4-1A0A0J9YWV2 114 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 TMEM178BH3BS89 294 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 DBHP09172 617 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 CPT2P23786 658 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 CDKN2AP42771 156 aaKnown RBP15.79■□□□□ 0.12
CPSF2-203ENST00000554290 SMIM11AP58511 58 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 ZNF154Q13106 437 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 HNRNPA0Q13151 305 aaKnown RBP15.79■□□□□ 0.12
CPSF2-203ENST00000554290 ESCO2Q56NI9 601 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 ZDHHC22Q8N966 263 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 OR52J3Q8NH60 311 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 DVL3Q92997 716 aaPredicted RBP15.79■□□□□ 0.12
CPSF2-203ENST00000554290 ERMAPQ96PL5 475 aaPredicted RBP15.79■□□□□ 0.12
CPSF2-203ENST00000554290 SIGLEC11Q96RL6 698 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 GPA33Q99795 319 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 GCM1Q9NP62 436 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 ESM1Q9NQ30 184 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 PTTG3PQ9NZH4 202 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 NUP50Q9UKX7 468 aa15.79■□□□□ 0.12
CPSF2-203ENST00000554290 TRAPPC2LH3BP13 241 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 IMPA2O14732 288 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 ZNF12P17014 697 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 SRP9P49458 86 aaKnown RBP15.78■□□□□ 0.12
CPSF2-203ENST00000554290 ERFP50548 548 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 FXYD6P3P58550 94 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 UBA52P62987 128 aaKnown RBP15.78■□□□□ 0.12
CPSF2-203ENST00000554290 HIST1H3AP68431 136 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 HLXQ14774 488 aaPredicted RBP15.78■□□□□ 0.12
CPSF2-203ENST00000554290 SEC23BQ15437 767 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 HIST2H3PS2Q5TEC6 136 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 OR2T2Q6IF00 324 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 HIST2H3AQ71DI3 136 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.78■□□□□ 0.12
CPSF2-203ENST00000554290 SGMS2Q8NHU3 365 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 COQ7Q99807 217 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 MED4Q9NPJ6 270 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 ADA2Q9NZK5 511 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 OR5V1Q9UGF6 321 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 LRCH1Q9Y2L9 728 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 INSIG2Q9Y5U4 225 aa15.78■□□□□ 0.12
CPSF2-203ENST00000554290 A8MXK9 166 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 F5H0A9 414 aaPredicted RBP15.77■□□□□ 0.12
CPSF2-203ENST00000554290 DIRAS1O95057 198 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 PPP1R3DO95685 299 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 RBMXP38159 391 aaKnown RBP15.77■□□□□ 0.12
CPSF2-203ENST00000554290 MMP16P51512 607 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 SEC61A1P61619 476 aaKnown RBP15.77■□□□□ 0.12
CPSF2-203ENST00000554290 JAZF1Q86VZ6 243 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 OR10AD1Q8NGE0 317 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 MEGF10Q96KG7 1140 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 DHRS1Q96LJ7 313 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 TSSK2Q96PF2 358 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 HCAR1Q9BXC0 346 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 SRA1Q9HD15 236 aaKnown RBP15.77■□□□□ 0.12
CPSF2-203ENST00000554290 B9D1Q9UPM9 204 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 PPIAL4AQ9Y536 164 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 LHFPL6Q9Y693 200 aa15.77■□□□□ 0.12
CPSF2-203ENST00000554290 DYSFO75923 2080 aa15.77■□□□□ 0.11
CPSF2-203ENST00000554290 LRRC30A6NM36 301 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 DCTN6O00399 190 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 SPRY1O43609 319 aaPredicted RBP15.76■□□□□ 0.11
CPSF2-203ENST00000554290 GADD45GO95257 159 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 RENP00797 406 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 SELEP16581 610 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 PRDX6P30041 224 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 SLC6A6P31641 620 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 COX10Q12887 443 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 MEP1BQ16820 701 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 RFX4Q33E94 735 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 SLC36A3Q495N2 470 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 LEG1Q6P5S2 330 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 FAM86B1Q8N7N1 296 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 FANK1Q8TC84 345 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 FUZQ9BT04 418 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 GORASP2Q9H8Y8 452 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 WNK2Q9Y3S1 2297 aa15.76■□□□□ 0.11
CPSF2-203ENST00000554290 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
CPSF2-203ENST00000554290 CEACAM18A8MTB9 384 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms