RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PURGQ9UJV8 347 aaKnown RBP2.6□□□□□ -1.99
SLIRP-202ENST00000553981 NUP50Q9UKX7 468 aa2.6□□□□□ -1.99
SLIRP-202ENST00000553981 RASD1Q9Y272 281 aa2.6□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF443Q9Y2A4 671 aaPredicted RBP2.6□□□□□ -1.99
SLIRP-202ENST00000553981 TMED5Q9Y3A6 229 aa2.6□□□□□ -1.99
SLIRP-202ENST00000553981 UGT2A1Q9Y4X1 527 aa2.6□□□□□ -1.99
SLIRP-202ENST00000553981 MMP24Q9Y5R2 645 aa2.6□□□□□ -1.99
SLIRP-202ENST00000553981 DOCK11Q5JSL3 2073 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MGAM2Q2M2H8 2515 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A0A087WUJ7 227 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV1-69-2A0A0G2JMI3 117 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A0A0G2JMP0 313 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV3-64DA0A0J9YX35 117 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A0A0X1KG70 313 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 LOC102725191A0A1B0GVB3 256 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PRSS51A0A1B0GVH4 220 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A0A1B0GW55 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A0A1B0GWA3 101 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 C5orf63A6NC05 138 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 GAGE12JA6NER3 117 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SMIM23A6NLE4 172 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUXAA6NLW8 204 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 A8MXK9 166 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CLDN34H7C241 214 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PLPP3O14495 311 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SDHDO14521 159 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TYROBPO43914 113 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CRCPO75575 148 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CLPXO76031 633 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MFN2O95140 757 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PPP1R3DO95685 299 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 BCL10O95999 233 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 AK1P00568 194 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV3-13P01766 116 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SERPINA5P05154 406 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 BCHEP06276 602 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ANXA2P07355 339 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SFTPBP07988 381 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 WNT2P09544 360 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L2P0CJ85 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L3P0CJ86 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L4P0CJ87 422 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L5P0CJ88 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L6P0CJ89 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L7P0CJ90 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 NEFHP12036 1026 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MMP9P14780 707 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF43P17038 809 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 FUT1P19526 365 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PRPS1L1P21108 318 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PAX6P26367 422 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CASQ1P31415 396 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CDAP32320 146 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 HPCAL1P37235 193 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 HTR3AP46098 478 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CAPZA2P47755 286 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CRYBA2P53672 197 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 UCP2P55851 309 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MRPS11P82912 194 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 FMODQ06828 376 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ZMYND11Q15326 602 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 HIST3H3Q16695 136 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 GSTA3Q16772 222 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SMU1Q2TAY7 513 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TRMT5Q32P41 509 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 GFOD2Q3B7J2 385 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CCDC153Q494R4 210 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 FAM76BQ5HYJ3 339 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 THEM4Q5T1C6 240 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 KPRPQ5T749 579 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 OLFML2AQ68BL7 652 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 WBP2NLQ6ICG8 309 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CCDC144NLQ6NUI1 221 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 C16orf87Q6PH81 154 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4L9Q6RFH8 374 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 FIP1L1Q6UN15 594 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 Q6ZSV7 163 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 Q6ZTK2 550 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 C9orf139Q6ZV77 190 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 BPIFB2Q8N4F0 458 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 GPR32P1Q8NGA4 272 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 OR4M2Q8NGB6 313 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 OR52N4Q8NGI2 321 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 OR9I1Q8NGQ6 314 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF420Q8TAQ5 688 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 FAM110DQ8TAY7 271 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SLC25A40Q8TBP6 338 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TCP10LQ8TDR4 215 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CCL17Q92583 94 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 HDAC2Q92769 488 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PMM1Q92871 262 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 POP5Q969H6 163 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TESCQ96BS2 214 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MOAP1Q96BY2 351 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TUBGCP3Q96CW5 907 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ZHX1-C8orf76Q96EF9 292 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 POM121L2Q96KW2 1035 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PPP3R2Q96LZ3 170 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms