RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 OR7A5Q15622 319 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SMAD2Q15796 467 aaKnown RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 C3orf33Q6P1S2 294 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SLC29A4Q7RTT9 530 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 FJX1Q86VR8 437 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 BEST3Q8N1M1 668 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR52N4Q8NGI2 321 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR52H1Q8NGJ2 320 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR10S1Q8NGN2 331 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 THRSPQ92748 146 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ADAT3Q96EY9 351 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SEC22AQ96IW7 307 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SOX7Q9BT81 388 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 EMC6Q9BV81 110 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 B3GNT4Q9C0J1 378 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CST11Q9H112 138 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ALX4Q9H161 411 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 PTGES2Q9H7Z7 377 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 BARX1Q9HBU1 254 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 GDF2Q9UK05 429 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 VDAC3Q9Y277 283 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CEP192Q8TEP8 1941 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SDK1Q7Z5N4 2213 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 MED12Q93074 2177 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 TMEM269A0A1B0GVZ9 245 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 RNF222A6NCQ9 220 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 RAB27BO00194 218 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SULT1C2O00338 296 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CD8AP01732 235 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CD34P28906 385 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 LUMP51884 338 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 PNLIPRP2P54317 469 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ATP1B3P54709 279 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 DCAF7P61962 342 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 FOXF1Q12946 379 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 PPP1R1AQ13522 171 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 TDGQ13569 410 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF260Q3ZCT1 412 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 C14orf28Q4W4Y0 310 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 C1orf100Q5SVJ3 147 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 JMJD6Q6NYC1 403 aaPredicted RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CFAP77Q6ZQR2 320 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 TRAPPC6BQ86SZ2 158 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF546Q86UE3 836 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 PDZD9Q8IXQ8 264 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 LHFPL5Q8TAF8 219 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 AQP3Q92482 292 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 FGGYQ96C11 551 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SPACA5Q96QH8 159 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 KCNK17Q96T54 332 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 DPYSL5Q9BPU6 564 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 NUDT22Q9BRQ3 303 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SCPEP1Q9HB40 452 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF304Q9HCX3 659 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SLC22A11Q9NSA0 550 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 CENPMQ9NSP4 180 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 FAM206AQ9NX38 181 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 COPS7AQ9UBW8 275 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 NOP16Q9Y3C1 178 aaKnown RBP6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 SESN1Q9Y6P5 492 aa6.18□□□□□ -1.42
LINC-ROR-201ENST00000553704 IGHV1OR21-1A0A087WYE8 117 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR5H14A6NHG9 310 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR2AT4A6NND4 320 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 RHPN2P1A8MT19 583 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 NPIPA5E9PKD4 350 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 H3BML4 177 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 TTRP02766 147 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ISG15P05161 165 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 GNB3P16520 340 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZBTB25P24278 435 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 CD96P40200 585 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 CAPZA1P52907 286 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 HSD11B2P80365 405 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF273Q14593 569 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 PTCRAQ6ISU1 281 aaPredicted RBP6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 TFAP2EQ6VUC0 442 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF813Q6ZN06 617 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 COX15Q7KZN9 410 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 RHOUQ7L0Q8 258 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 HSD17B13Q7Z5P4 300 aaPredicted RBP6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF584Q8IVC4 421 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ADAD2Q8NCV1 583 aaKnown RBP6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 TSTD1Q8NFU3 115 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 OR2I1PQ8NGU4 316 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 CCDC107Q8WV48 283 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 DAZLQ92904 295 aaKnown RBP6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZDHHC12Q96GR4 267 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 MICU1Q9BPX6 476 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 SLC25A21Q9BQT8 299 aaPredicted RBP6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 NICN1Q9BSH3 213 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 TMEM185BQ9H7F4 350 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 UPB1Q9UBR1 384 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 NPIPA1Q9UND3 350 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 TNFSF18Q9UNG2 199 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 CPED1A4D0V7 1026 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 KRBOX1C9JBD0 128 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 D6RAR5 112 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 SSX5O60225 188 aa6.17□□□□□ -1.42
LINC-ROR-201ENST00000553704 ZNF217O75362 1048 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms