RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ZNF621Q6ZSS3 439 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 AHSA2Q719I0 299 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 NIPA1Q7RTP0 329 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 CALHM1Q8IU99 346 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 BBS7Q8IWZ6 715 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PUSL1Q8N0Z8 303 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 KIF2BQ8N4N8 673 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 JAGN1Q8N5M9 183 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 C2orf73Q8N5S3 287 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 TMEM251Q8N6I4 163 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZNF738Q8NE65 137 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 OR2L5Q8NG80 312 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 OR6N2Q8NGY6 317 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 MAGEE2Q8TD90 523 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 KCTD4Q8WVF5 259 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TFB1MQ8WVM0 346 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 NR4A3Q92570 626 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TFGQ92734 400 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 UBE2E3Q969T4 207 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PTH2Q96A98 100 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ISOC2Q96AB3 205 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PPWD1Q96BP3 646 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 TCEAL4Q96EI5 215 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZBED6CLQ96FA7 236 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 TIMD4Q96H15 378 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZNF75AQ96N20 296 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TSC22D3Q99576 134 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 MICU1Q9BPX6 476 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TRIM51Q9BSJ1 452 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 NAT10Q9H0A0 1025 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 PCBD2Q9H0N5 130 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ING2Q9H160 280 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 POPDC2Q9HBU9 364 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 MYOZ1Q9NP98 299 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 FBXO8Q9NRD0 319 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 CTPS2Q9NRF8 586 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 SLC2A9Q9NRM0 540 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ARMCX1Q9P291 453 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 GUCA1BQ9UMX6 200 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 STYXL1Q9Y6J8 313 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 V9GYY9 64 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 EIF3AQ14152 1382 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 ANKRD30BQ9BXX2 1392 aa3□□□□□ -1.93
TDP1-207ENST00000553617 PHF3Q92576 2039 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 TRAV9-2A0A087WT02 112 aa3□□□□□ -1.93
TDP1-207ENST00000553617 A0A1B0GV72 72 aa3□□□□□ -1.93
TDP1-207ENST00000553617 A0A1W2PPV9 198 aa3□□□□□ -1.93
TDP1-207ENST00000553617 A0A1W2PRF3 423 aa3□□□□□ -1.93
TDP1-207ENST00000553617 A0A1W2PRM7 423 aa3□□□□□ -1.93
TDP1-207ENST00000553617 A6NIZ1 184 aa3□□□□□ -1.93
TDP1-207ENST00000553617 KRTAP16-1A8MUX0 517 aa3□□□□□ -1.93
TDP1-207ENST00000553617 C9J4A7 227 aa3□□□□□ -1.93
TDP1-207ENST00000553617 E9PAM4 449 aa3□□□□□ -1.93
TDP1-207ENST00000553617 E9PLD3 99 aa3□□□□□ -1.93
TDP1-207ENST00000553617 H0Y980 276 aa3□□□□□ -1.93
TDP1-207ENST00000553617 H3BNH8 94 aa3□□□□□ -1.93
TDP1-207ENST00000553617 SULT1C2O00338 296 aa3□□□□□ -1.93
TDP1-207ENST00000553617 KPNA3O00505 521 aaPredicted RBP3□□□□□ -1.93
TDP1-207ENST00000553617 SLC31A2O15432 143 aa3□□□□□ -1.93
TDP1-207ENST00000553617 MAGEB4O15481 346 aaPredicted RBP3□□□□□ -1.93
TDP1-207ENST00000553617 SGCEO43556 437 aa3□□□□□ -1.93
TDP1-207ENST00000553617 GALR3O60755 368 aaPredicted RBP3□□□□□ -1.93
TDP1-207ENST00000553617 PFDN1O60925 122 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CCNKO75909 580 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CTDNEP1O95476 244 aa3□□□□□ -1.93
TDP1-207ENST00000553617 TMEM50AO95807 157 aa3□□□□□ -1.93
TDP1-207ENST00000553617 HLA-HP01893 362 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CDK1P06493 297 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CT62P0C5K7 136 aa3□□□□□ -1.93
TDP1-207ENST00000553617 ZNF43P17038 809 aa3□□□□□ -1.93
TDP1-207ENST00000553617 BCL3P20749 454 aa3□□□□□ -1.93
TDP1-207ENST00000553617 GCAP28676 217 aa3□□□□□ -1.93
TDP1-207ENST00000553617 PRDX3P30048 256 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 LEPP41159 167 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CYB561P49447 251 aa3□□□□□ -1.93
TDP1-207ENST00000553617 TMED10P49755 219 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 DAP3P51398 398 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 TMEM33P57088 247 aa3□□□□□ -1.93
TDP1-207ENST00000553617 AP1S1P61966 158 aa3□□□□□ -1.93
TDP1-207ENST00000553617 ZNF45Q02386 682 aa3□□□□□ -1.93
TDP1-207ENST00000553617 PAX2Q02962 417 aa3□□□□□ -1.93
TDP1-207ENST00000553617 TPBGQ13641 420 aa3□□□□□ -1.93
TDP1-207ENST00000553617 VGLL4Q14135 290 aa3□□□□□ -1.93
TDP1-207ENST00000553617 PSG5Q15238 335 aa3□□□□□ -1.93
TDP1-207ENST00000553617 TOMM34Q15785 309 aaPredicted RBP3□□□□□ -1.93
TDP1-207ENST00000553617 POU2AF1Q16633 256 aa3□□□□□ -1.93
TDP1-207ENST00000553617 ISXQ2M1V0 245 aa3□□□□□ -1.93
TDP1-207ENST00000553617 RFX4Q33E94 735 aa3□□□□□ -1.93
TDP1-207ENST00000553617 SPIN3Q5JUX0 258 aa3□□□□□ -1.93
TDP1-207ENST00000553617 CCNJQ5T5M9 372 aa3□□□□□ -1.93
TDP1-207ENST00000553617 MARC1Q5VT66 337 aa3□□□□□ -1.93
TDP1-207ENST00000553617 SDHAF4Q5VUM1 108 aa3□□□□□ -1.93
TDP1-207ENST00000553617 TRIQKQ629K1 86 aa3□□□□□ -1.93
TDP1-207ENST00000553617 APOBEC3HQ6NTF7 200 aaKnown RBP3□□□□□ -1.93
TDP1-207ENST00000553617 ZNF544Q6NX49 715 aa3□□□□□ -1.93
TDP1-207ENST00000553617 C4orf22Q6V702 233 aa3□□□□□ -1.93
TDP1-207ENST00000553617 MBOAT1Q6ZNC8 495 aa3□□□□□ -1.93
TDP1-207ENST00000553617 ZNF497Q6ZNH5 498 aa3□□□□□ -1.93
TDP1-207ENST00000553617 ACOT7LQ6ZUV0 252 aa3□□□□□ -1.93
TDP1-207ENST00000553617 COX15Q7KZN9 410 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms