RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PSD2Q9BQI7 771 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 THTPAQ9BU02 230 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 EMC6Q9BV81 110 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RSPO3Q9BXY4 272 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ACTR6Q9GZN1 396 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 EVA1AQ9H8M9 152 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NANSQ9NR45 359 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NDE1Q9NXR1 346 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 SEC14L4Q9UDX3 406 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 KCNN3Q9UGI6 736 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RASD1Q9Y272 281 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 LRBAP50851 2863 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RELNP78509 3460 aa4.09□□□□□ -1.76
ATXN3-220ENST00000553491 YLPM1P49750 1951 aaKnown RBP4.09□□□□□ -1.76
ATXN3-220ENST00000553491 ROS1P08922 2347 aa4.09□□□□□ -1.76
ATXN3-220ENST00000553491 DOPEY1Q5JWR5 2465 aa4.09□□□□□ -1.76
ATXN3-220ENST00000553491 FLNBO75369 2602 aaKnown RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CELSR2Q9HCU4 2923 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 A0A0B4J2E0 115 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 A0A1B0GX12 115 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 A0A1W2PQ09 198 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF724A8MTY0 619 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 M0R1B8 84 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 M0R3G1 203 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 GNGT2O14610 69 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CLOCKO15516 846 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CHP2O43745 196 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TMCC2O75069 709 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 PDE5AO76074 875 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 VAMP5O95183 116 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 BGLAPP02818 100 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 LCATP04180 440 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SAGP10523 405 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 GGT1P19440 569 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CALB2P22676 271 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 IGHV1-2P23083 117 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 EDNRAP25101 427 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CHATP28329 748 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 RPL4P36578 427 aaKnown RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 OR3A2P47893 321 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 ERFP50548 548 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 BIDP55957 195 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 MYBPC1Q00872 1141 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 EGR4Q05215 589 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 LTBQ06643 244 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 ST3GAL3Q11203 375 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CAMK2DQ13557 499 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TRAM2Q15035 370 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 FGD3Q5JSP0 725 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TSPO2Q5TGU0 170 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 FBXW9Q5XUX1 488 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TBPL2Q6SJ96 375 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 C5orf46Q6UWT4 87 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TRPM8Q7Z2W7 1104 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 NANOGNBQ7Z5D8 188 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 DHFR2Q86XF0 187 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 PGAM4Q8N0Y7 254 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 OR51A7Q8NH64 312 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 PFN4Q8NHR9 129 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM255BQ8WV15 326 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM239Q8WW34 195 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 HSD17B8Q92506 261 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SLC35B4Q969S0 331 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SGTBQ96EQ0 304 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 PYURFQ96I23 114 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TXNDC15Q96J42 360 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 LURAP1Q96LR2 239 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 DACH2Q96NX9 599 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 LIME1Q9H400 295 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 RERGLQ9H628 205 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 ESRP2Q9H6T0 727 aaKnown RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 NGBQ9NPG2 151 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 KRCC1Q9NPI7 259 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 B3GAT2Q9NPZ5 323 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SLC7A10Q9NS82 523 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 MED29Q9NX70 200 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 POU2F3Q9UKI9 436 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 TMCC3Q9ULS5 477 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
ATXN3-220ENST00000553491 AURKCQ9UQB9 309 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 POFUT2Q9Y2G5 429 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 MED31Q9Y3C7 131 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 FLVCR1Q9Y5Y0 555 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 GMEB1Q9Y692 573 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 SESN1Q9Y6P5 492 aa4.08□□□□□ -1.76
ATXN3-220ENST00000553491 CREBBPQ92793 2442 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PRRC2AP48634 2157 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 DOCK11Q5JSL3 2073 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 IGKV1D-42A0A075B6H8 117 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 A0A1W2PRG6 482 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ERICH4A6NGS2 130 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ENO4A6NNW6 628 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms