RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SEC61A2Q9H9S3 476 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 CKLFQ9UBR5 152 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 STEAP1Q9UHE8 339 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 FBXL3Q9UKT7 428 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 TMEM269A0A1B0GVZ9 245 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 C21orf140B9A014 251 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
ABCD4-218ENST00000553486 CFPP27918 469 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 DGCR2P98153 550 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 TOMM20Q15388 145 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 CARD17Q5XLA6 110 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 B3GNTL1Q67FW5 361 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-218ENST00000553486 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-218ENST00000553486 DNAAF1Q8NEP3 725 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 C7orf50Q9BRJ6 194 aaKnown RBP13.6□□□□□ -0.23
ABCD4-218ENST00000553486 MARVELD1Q9BSK0 173 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 G6PC2Q9NQR9 355 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 POLR1DQ9Y2S0 133 aa13.6□□□□□ -0.23
ABCD4-218ENST00000553486 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 ORC5O43913 435 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 RAD1O60671 282 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 RAMP1O60894 148 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 TPPPO94811 219 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 QDPRP09417 244 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 CD3GP09693 182 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 UBCP0CG48 685 aaKnown RBP13.59□□□□□ -0.23
ABCD4-218ENST00000553486 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 SLC6A1P30531 599 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 DNASE1L1P49184 302 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 MMP16P51512 607 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 CLDN17P56750 224 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 SMIM4Q8WVI0 70 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 HAVCR1Q96D42 359 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 IL17BQ9UHF5 180 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 ZNF221Q9UK13 617 aa13.59□□□□□ -0.23
ABCD4-218ENST00000553486 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
ABCD4-218ENST00000553486 FLNCQ14315 2725 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 EIF1AYO14602 144 aaKnown RBP13.58□□□□□ -0.24
ABCD4-218ENST00000553486 FSTP19883 344 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 DLSTP36957 453 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 CYB561P49447 251 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 MRPS10P82664 201 aaKnown RBP13.58□□□□□ -0.24
ABCD4-218ENST00000553486 POU4F3Q15319 338 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 KCNMB1Q16558 191 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-218ENST00000553486 RHOUQ7L0Q8 258 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 IZUMO1Q8IYV9 350 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 OR13C3Q8NGS6 347 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 NIPAL2Q9H841 368 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 MED12Q93074 2177 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 DOCK10Q96BY6 2186 aa13.58□□□□□ -0.24
ABCD4-218ENST00000553486 PHF3Q92576 2039 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 LOC107986453A0A1B0GWG9 222 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 MEGF11A6BM72 1044 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 NPIPA2E9PIF3 369 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 INMT-MINDY4F8WBC2 141 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 NPIPA3F8WFD2 350 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 DNPH1O43598 174 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 MNDAP41218 407 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 GUCA1AP43080 201 aaPredicted RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 EIF1AXP47813 144 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 SRP9P49458 86 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 BTG1P62324 171 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 TATDN3Q17R31 274 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 RNASE12Q5GAN4 147 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 PRSS45Q7RTY3 260 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 UBASH3BQ8TF42 649 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 THOC3Q96J01 351 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 PLEKHA1Q9HB21 404 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 A0A0J9YW62 118 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 ZNF891A8MT65 544 aaPredicted RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 ZNF878C9JN71 531 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 GABARAPH6UMI1 98 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 SLC17A2O00624 439 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 IGFBP3P17936 291 aaPredicted RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 KLK2P20151 261 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 DDOSTP39656 456 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 CSNK1A1P48729 337 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
ABCD4-218ENST00000553486 CBX3Q13185 183 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 DYRK1AQ13627 763 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 RAB11BQ15907 218 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 PLA1AQ53H76 456 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 SIAH3Q8IW03 269 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 BEST3Q8N1M1 668 aa13.57□□□□□ -0.24
ABCD4-218ENST00000553486 OR14L1PQ8NHC6 308 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms