RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CBX1P83916 185 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 NKPD1Q17RQ9 610 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 PCGF3Q3KNV8 242 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 SLC36A3Q495N2 470 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 SPRNQ5BIV9 151 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 Q6ZR03 302 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 SPATA24Q86W54 205 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 DUS3LQ96G46 650 aaKnown RBP16.4■□□□□ 0.22
PTCH1-227ENST00000553256 HCAR1Q9BXC0 346 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 CHODLQ9H9P2 273 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 CMC2Q9NRP2 79 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 PDP1Q9P0J1 537 aaPredicted RBP16.4■□□□□ 0.22
PTCH1-227ENST00000553256 LRP5LA4QPB2 252 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 CLUP10909 449 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 OTX1P32242 354 aaPredicted RBP16.39■□□□□ 0.21
PTCH1-227ENST00000553256 CRYBB2P43320 205 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 SELENOVP59797 346 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 MOGQ16653 247 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 ACSM5Q6NUN0 579 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 UNQ6126/PRO20091Q6UXV3 157 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 ASRGL1Q7L266 308 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 LINC00346Q8IVM7 164 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 ICA1LQ8NDH6 482 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 PTP4A1Q93096 173 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 HAVCR1Q96D42 359 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 MSI2Q96DH6 328 aaKnown RBP16.39■□□□□ 0.21
PTCH1-227ENST00000553256 C1QTNF5Q9BXJ0 243 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 ZNF275Q9NSD4 429 aaPredicted RBP16.39■□□□□ 0.21
PTCH1-227ENST00000553256 KCNG2Q9UJ96 466 aa16.39■□□□□ 0.21
PTCH1-227ENST00000553256 A0A1B0GWJ7 208 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 WNT9BO14905 357 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 ATP5HO75947 161 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 CD55P08174 381 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 SPI1P17947 270 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 PRKACGP22612 351 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 GCH1P30793 250 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 GRK5P34947 590 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 RPS27P42677 84 aaKnown RBP16.38■□□□□ 0.21
PTCH1-227ENST00000553256 ZNF81P51508 661 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 TMEM33P57088 247 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 CCL8P80075 99 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 CDK5R2Q13319 367 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 CARTPTQ16568 116 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 TEX30Q5JUR7 227 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 FAM209AQ5JX71 171 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 ARL9Q6T311 187 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 FBXW12Q6X9E4 464 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 IQCF1Q8N6M8 205 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 OR51L1Q8NGJ5 315 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 OR9Q1Q8NGQ5 310 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 OR2T4Q8NH00 348 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 MMADHCQ9H3L0 296 aaPredicted RBP16.38■□□□□ 0.21
PTCH1-227ENST00000553256 WDR76Q9H967 626 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 DDX28Q9NUL7 540 aaKnown RBP16.38■□□□□ 0.21
PTCH1-227ENST00000553256 TMEM160Q9NX00 188 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 CGGBP1Q9UFW8 167 aaPredicted RBP16.38■□□□□ 0.21
PTCH1-227ENST00000553256 GPR160Q9UJ42 338 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 PURGQ9UJV8 347 aaKnown RBP16.38■□□□□ 0.21
PTCH1-227ENST00000553256 GRIP1Q9Y3R0 1128 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 COMMD3-BMI1R4GMX3 469 aa16.38■□□□□ 0.21
PTCH1-227ENST00000553256 TVP23AA6NH52 213 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 GYPBP06028 91 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 ACSM4P0C7M7 580 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 ARHGDIAP52565 204 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 CDK5Q00535 292 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 CCNIQ14094 377 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 CYB5R2Q6BCY4 276 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 FAHD1Q6P587 224 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 TMEM154Q6P9G4 183 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 SHQ1Q6PI26 577 aaKnown RBP16.37■□□□□ 0.21
PTCH1-227ENST00000553256 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-227ENST00000553256 HIPK1Q86Z02 1210 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 HPS1Q92902 700 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 CMBLQ96DG6 245 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 NRBF2Q96F24 287 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 CACNG2Q9Y698 323 aa16.37■□□□□ 0.21
PTCH1-227ENST00000553256 ATRQ13535 2644 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 MXRA5Q9NR99 2828 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 A8MV72 311 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-227ENST00000553256 OSMP13725 252 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 RAC2P15153 192 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 ZNF16P17020 682 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-227ENST00000553256 LIPAP38571 399 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 CENPAP49450 140 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 RGS6P49758 472 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 GZMKP49863 264 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 NAA40Q86UY6 237 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 ZNF511Q8NB15 262 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 PROKR2Q8NFJ6 384 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 ST7LQ8TDW4 575 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 SNX33Q8WV41 574 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 MSL2Q9HCI7 577 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 YAE1D1Q9NRH1 226 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 CYSLTR2Q9NS75 346 aa16.36■□□□□ 0.21
PTCH1-227ENST00000553256 FBN1P35555 2871 aaKnown RBP16.35■□□□□ 0.21
PTCH1-227ENST00000553256 TIPRLO75663 272 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 ANXA8P13928 327 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms