RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 EPXP11678 715 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 HSD11B1P28845 292 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 TAF13Q15543 124 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 BCL2L15Q5TBC7 163 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 STAC2Q6ZMT1 411 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF704Q6ZNC4 412 aaPredicted RBP17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 NUFIP2Q7Z417 695 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 MCEMP1Q8IX19 187 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ELMOD2Q8IZ81 293 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC22A24Q8N4F4 322 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ACOT12Q8WYK0 555 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 KCTD12Q96CX2 325 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 PBOV1Q9GZY1 135 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 CLCF1Q9UBD9 225 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 DAPK2Q9UIK4 370 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 B3GNT3Q9Y2A9 372 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 CACNA1GO43497 2377 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 TRAV8-7A0A075B6U6 113 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 OR6C65A6NJZ3 312 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 PRKXP51817 358 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 GRB2P62993 217 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 IFITM3Q01628 133 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 RSPO1Q2MKA7 263 aaPredicted RBP17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 TSEN15Q8WW01 171 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 APH1AQ96BI3 265 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 ABHD17AQ96GS6 310 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 GP6Q9HCN6 339 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 NUFIP1Q9UHK0 495 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 LHX6Q9UPM6 363 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 V9GYH0 126 aa17.17■□□□□ 0.34
RBFOX1-215ENST00000553186 LOC107986453A0A1B0GWG9 222 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 RRP8O43159 456 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 KRT33AO76009 404 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC2A2P11168 524 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 FCGR2AP12318 317 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ACHEP22303 614 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ANOS1P23352 680 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 AGTR1P30556 359 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 PLEKHN1Q494U1 663 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 NRN1LQ496H8 165 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ELFN2Q5R3F8 820 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ASPHD2Q6ICH7 369 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 RPUSD3Q6P087 351 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 PRSS45Q7RTY3 260 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 LRRTM1Q86UE6 522 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 SNX29P2Q8IUI4 249 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 THRSPQ92748 146 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 HHLA2Q9UM44 414 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ATMQ13315 3056 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ACSM4P0C7M7 580 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 UBCP0CG48 685 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ADRA2CP18825 462 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ATF1P18846 271 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 OTX1P32242 354 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF121P58317 390 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 PPP3R1P63098 170 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 STK11Q15831 433 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 TMEM244Q5VVB8 128 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 SARAFQ96BY9 339 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 KCNJ15Q99712 375 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 MOB1AQ9H8S9 216 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 TCF7L1Q9HCS4 588 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 DHDHQ9UQ10 334 aa17.16■□□□□ 0.34
RBFOX1-215ENST00000553186 PIEZO1Q92508 2521 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 HPGDSO60760 199 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 CX3CR1P49238 355 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 GALK2Q01415 458 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 TBR1Q16650 682 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 MZT2AQ6P582 158 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 PLEK2Q9NYT0 353 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF319Q9P2F9 582 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 P2RY10O00398 339 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC2A1P11166 492 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 APEX1P27695 318 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 FOXG1P55316 489 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 SKA3Q8IX90 412 aa17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 SDHCQ99643 169 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF587BE7ETH6 402 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 PDCD5O14737 125 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 PAHP00439 452 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF813Q6ZN06 617 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF627Q7L945 461 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 FGFBP3Q8TAT2 258 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 DIRAS2Q96HU8 199 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 GMPPAQ96IJ6 420 aaPredicted RBP17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 SLITRK2Q9H156 845 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 FREM1Q5H8C1 2179 aa17.14■□□□□ 0.33
RBFOX1-215ENST00000553186 SYNGR3O43761 229 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 PATE4P0C8F1 98 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF32P17041 273 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ARF1P84077 181 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF79Q15937 498 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 NAA40Q86UY6 237 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF100Q8IYN0 542 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF433Q8N7K0 673 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF283Q8N7M2 679 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 OR8B12Q8NGG6 310 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 OR5M9Q8NGP3 310 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 SLC7A6Q92536 515 aa17.13■□□□□ 0.33
RBFOX1-215ENST00000553186 EXTL1Q92935 676 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms