RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 KDM4DQ6B0I6 523 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 TMEM225Q6GV28 225 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ABLIM2Q6H8Q1 611 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 RPL13AP3Q6NVV1 102 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 H1FNTQ75WM6 255 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 HIST3H2AQ7L7L0 130 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PXKQ7Z7A4 578 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 OAFQ86UD1 273 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PARP8Q8N3A8 854 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 C10orf53Q8N6V4 93 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 CLDN22Q8N7P3 220 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 TMEM99Q8N816 258 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ZBTB34Q8NCN2 500 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ICA1LQ8NDH6 482 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 OR5J2Q8NH18 312 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 MBD3L2Q8NHZ7 208 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 FNDC9Q8TBE3 224 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ZFAND2BQ8WV99 257 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 HIST1H2ACQ93077 130 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 DNAJA3Q96EY1 480 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PRR25Q96S07 402 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 GPA33Q99795 319 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 CIB1Q99828 191 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 NIPSNAP1Q9BPW8 284 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 C9orf16Q9BUW7 83 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 CXorf56Q9H5V9 222 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 CHODLQ9H9P2 273 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF556Q9HAH1 456 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 C8orf4Q9NR00 106 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 GLRX2Q9NS18 164 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 TAS2R5Q9NYW4 299 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 IL20Q9NYY1 176 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 USE1Q9NZ43 259 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 KLHL9Q9P2J3 617 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 NKX1-2Q9UD57 310 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 RASD1Q9Y272 281 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 SIGLEC7Q9Y286 467 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 MAGED1Q9Y5V3 778 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 IGHV3-15A0A0B4J1V0 119 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 SAC3D1A6NKF1 404 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF716A6NP11 495 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF724A8MTY0 619 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 BLOC1S5-TXNDC5H3BN57 136 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 SS18L1O75177 396 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 AQP8O94778 261 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 NDUFB2O95178 105 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RCBTB2O95199 551 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OR6A2O95222 327 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 TGM6O95932 706 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 HPRP00739 348 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 IGHV4-39P01824 125 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 IGHMP01871 453 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ALPLP05186 524 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 CRHP06850 196 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ADORA3P0DMS8 318 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF26P17031 533 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ALDH3A2P51648 485 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 FXYD6P3P58550 94 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RPL18Q07020 188 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PUDPQ08623 228 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RASGEF1BQ0VAM2 473 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PMS2P3Q13401 168 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 DAG1Q14118 895 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 SLC17A1Q14916 467 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 GUSBP1Q15486 140 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RFX4Q33E94 735 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OGFRL1Q5TC84 451 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 CYB5R2Q6BCY4 276 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OR2A2Q6IF42 318 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PPP4R4Q6NUP7 873 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 SMARCD3Q6STE5 483 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 KLHL17Q6TDP4 642 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PLXDC2Q6UX71 529 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 NHLRC1Q6VVB1 395 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF813Q6ZN06 617 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF620Q6ZNG0 422 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZBTB49Q6ZSB9 765 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RASSF6Q6ZTQ3 369 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 FCRLAQ7L513 359 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 NANOGNBQ7Z5D8 188 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PACRGLQ8N7B6 248 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ATG16L2Q8NAA4 619 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 LRRC75AQ8NAA5 344 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OR9K2Q8NGE7 335 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OR13C2Q8NGS9 318 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 EME1Q96AY2 570 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 GMPPAQ96IJ6 420 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF48Q96MX3 618 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 ZFP3Q96NJ6 502 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RDH12Q96NR8 316 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 WFIKKN1Q96NZ8 548 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 OXGR1Q96P68 337 aa5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 FYTTD1Q96QD9 318 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 GPX7Q96SL4 187 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RBM4BQ9BQ04 359 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 RBM4Q9BWF3 364 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-210ENST00000551642 PRRG4Q9BZD6 226 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms