RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DOK2O60496 412 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 KRT34O76011 436 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TGDSO95455 350 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 ABHD16AO95870 558 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 IGHMP01871 453 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TFF1P04155 84 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 CTLA4P16410 223 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PPIBP23284 216 aaKnown RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 LIMS1P48059 325 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 CENPAP49450 140 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 ATP4BP51164 291 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 FGF12P61328 243 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 RPL27P61353 136 aaKnown RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 BTG1P62324 171 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 SUMO1P63165 101 aaKnown RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PAX2Q02962 417 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 VMACQ2NL98 169 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 CYBRD1Q53TN4 286 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 MESTQ5EB52 335 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 BEND6Q5SZJ8 279 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 FAM27BQ5VT28 67 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PRAMEF6Q5VXH4 476 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 MBNL2Q5VZF2 373 aaKnown RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 SFRP4Q6FHJ7 346 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 CYP2R1Q6VVX0 501 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PATL1Q86TB9 770 aaKnown RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 LRRC28Q86X40 367 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 KIRREL3Q8IZU9 778 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PARP8Q8N3A8 854 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 POU5F2Q8N7G0 328 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 C10orf82Q8WW14 230 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TMIGD2Q96BF3 282 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 ZMYND19Q96E35 227 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF583Q96ND8 569 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 JMJD8Q96S16 334 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TMEM246Q9BRR3 403 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PCGF1Q9BSM1 259 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 EGLN1Q9GZT9 426 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 KCNN2Q9H2S1 579 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TXNIPQ9H3M7 391 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TMEM165Q9HC07 324 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 GCM1Q9NP62 436 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 MAN2C1Q9NTJ4 1040 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 C19orf73Q9NVV2 129 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PLEK2Q9NYT0 353 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 ADA2Q9NZK5 511 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 VSX1Q9NZR4 365 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 A4GNTQ9UNA3 340 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 PPP1R3CQ9UQK1 317 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TIMM10BQ9Y5J6 103 aa5.71□□□□□ -1.5
PRPF40B-214ENST00000551320 TEX13CA0A0J9YWL9 993 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 A0A1B0GW55 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 C22orf46C9J442 243 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 F5H0A9 414 aaPredicted RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DCTN6O00399 190 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 SOCS2O14508 198 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FOXH1O75593 365 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FCN3O75636 299 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DIRAS1O95057 198 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PTHP01270 115 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MT-ND5P03915 603 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 CST2P09228 141 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 WNT2P09544 360 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L2P0CJ85 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L3P0CJ86 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L4P0CJ87 422 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L5P0CJ88 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L6P0CJ89 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L7P0CJ90 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 RPS2P15880 293 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 NCK1P16333 377 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MSR1P21757 451 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PAX6P26367 422 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 RPL4P36578 427 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 GDNFP39905 211 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 RPS27P42677 84 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MRPL19P49406 292 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DAP3P51398 398 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF133P52736 654 aaPredicted RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PAX8Q06710 450 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FOXL1Q12952 345 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MPPED2Q15777 294 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 CCDC92Q53HC0 331 aaPredicted RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4L9Q6RFH8 374 aaPredicted RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FIP1L1Q6UN15 594 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PTCHD4Q6ZW05 846 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 RHOUQ7L0Q8 258 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 TSEN54Q7Z6J9 526 aaKnown RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 CALHM3Q86XJ0 350 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 KLBQ86Z14 1044 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 LINC00346Q8IVM7 164 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 SLC30A8Q8IWU4 369 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 KLHL36Q8N4N3 616 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DPP10Q8N608 796 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF283Q8N7M2 679 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 OR10S1Q8NGN2 331 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DYDC1Q8WWB3 177 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 BPIFA2Q96DR5 249 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MPP4Q96JB8 637 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms