RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 GPX7Q96SL4 187 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-221ENST00000550914 C1QTNF5Q9BXJ0 243 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 NMNAT1Q9HAN9 279 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-221ENST00000550914 TMEM165Q9HC07 324 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 SAR1AQ9NR31 198 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 RHCGQ9UBD6 479 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 ASH2LQ9UBL3 628 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 MMP24Q9Y5R2 645 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 A0A1B0GWJ7 208 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 J3KTA2 159 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 SLC22A2O15244 555 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 KHDRBS3O75525 346 aaKnown RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 IGHV4-38-2P0DP08 117 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 TROVE2P10155 538 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 RPS2P15880 293 aaKnown RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 GPR4P46093 362 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 ERFP50548 548 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 BPIFB3P59826 476 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 GNB2P62879 340 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 OCLNQ16625 522 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 PGM2L1Q6PCE3 622 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 RRM2BQ7LG56 351 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 NLRC3Q7RTR2 1065 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 C1orf87Q8N0U7 546 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 SLC7A6Q92536 515 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 NEIL1Q96FI4 390 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF582Q96NG8 517 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 SLC30A2Q9BRI3 323 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 PRDM13Q9H4Q3 707 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 VIPAS39Q9H9C1 493 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 NRIP3Q9NQ35 241 aa10.76□□□□□ -0.69
PTCH1-221ENST00000550914 VSX1Q9NZR4 365 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-221ENST00000550914 LOC100653049A0A140TA62 436 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 KIR2DS1A0A191URI9 304 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 A0A1B0GUS0 222 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 IQCF6A8MYZ5 107 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 SLC16A7O60669 478 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 PTP4A3O75365 173 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 KRT34O76011 436 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 NDUFB2O95178 105 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
PTCH1-221ENST00000550914 GATA4P43694 442 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 KRR1Q13601 381 aaKnown RBP10.75□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF404Q494X3 552 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-221ENST00000550914 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 OR2T2Q6IF00 324 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 C1orf94Q6P1W5 598 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 CBLL1Q75N03 491 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 HDXQ7Z353 690 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 CYP4Z1Q86W10 505 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 OR5AS1Q8N127 324 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 CELF2-AS1Q8N7Q2 184 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 OR10AD1Q8NGE0 317 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 OR8B2Q96RD0 313 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 COQ7Q99807 217 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 TMEM246Q9BRR3 403 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 HDHD2Q9H0R4 259 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 SIGLEC7Q9Y286 467 aa10.75□□□□□ -0.69
PTCH1-221ENST00000550914 COA3Q9Y2R0 106 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-221ENST00000550914 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 A0A1W2PRQ8 180 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 CXCR6O00574 342 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 PHYHO14832 338 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 RER1O15258 196 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 MLNRO43193 412 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF682O95780 498 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 TXNDC12O95881 172 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 CYB5R3P00387 301 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-221ENST00000550914 DBHP09172 617 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 SELEP16581 610 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 PITPNBP48739 271 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 DGCR6Q14129 220 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 HLXQ14774 488 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF362Q5T0B9 420 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-221ENST00000550914 TBPL2Q6SJ96 375 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 FKBP9P1Q75LS8 142 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 POU5F2Q8N7G0 328 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF420Q8TAQ5 688 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-221ENST00000550914 SLC7A13Q8TCU3 470 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 ERGIC1Q969X5 290 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 TMIGD2Q96BF3 282 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 CMTM6Q9NX76 183 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 PTTG3PQ9NZH4 202 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 CAPN7Q9Y6W3 813 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms