RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 PLPPR2Q96GM1 343 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 COQ7Q99807 217 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 HDHD2Q9H0R4 259 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
ERBB3-215ENST00000550828 LAMP5Q9UJQ1 280 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 AKAP6Q13023 2319 aa11.69□□□□□ -0.54
ERBB3-215ENST00000550828 SNTNA6NMZ2 147 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF670-ZNF695F2Z2N8 137 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 COX5BP10606 129 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF35P13682 527 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 STOMP27105 288 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ETV1P50549 477 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ROM1Q03395 351 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ST3GAL4Q11206 333 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 MED21Q13503 144 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 NCMAPQ5T1S8 102 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 SP5Q6BEB4 398 aaPredicted RBP11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
ERBB3-215ENST00000550828 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ACBD7Q8N6N7 88 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 SLC30A7Q8NEW0 376 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 OR8B4Q96RC9 309 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ATF6BQ99941 703 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 DUSP21Q9H596 190 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 CENPMQ9NSP4 180 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 CNOT2Q9NZN8 540 aaKnown RBP11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ERVK-18Q9QC07 812 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 CLEC2DQ9UHP7 191 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 ATPIF1Q9UII2 106 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 LRP12Q9Y561 859 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 LRBAP50851 2863 aa11.68□□□□□ -0.54
ERBB3-215ENST00000550828 FBN2P35556 2912 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 EFCAB10A6NFE3 127 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF878C9JN71 531 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ATP6V1G2-DDX39BF2Z307 99 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 TMCC2O75069 709 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ACSM4P0C7M7 580 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 C21orf33P30042 268 aaPredicted RBP11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ATP6V1E1P36543 226 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 PLP2Q04941 152 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
ERBB3-215ENST00000550828 MSMPQ1L6U9 139 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 KLHL22Q53GT1 634 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 BEX5Q5H9J7 111 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 RBM48Q5RL73 367 aaKnown RBP11.67□□□□□ -0.54
ERBB3-215ENST00000550828 PLEKHG7Q6ZR37 379 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 RFPL4BQ6ZWI9 263 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 LHFPL3Q86UP9 236 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 KBTBD8Q8NFY9 601 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 MNTQ99583 582 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 TMEM204Q9BSN7 226 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 COPS4Q9BT78 406 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 POFUT1Q9H488 388 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ELOVL3Q9HB03 270 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 ERVK13-1Q9NX77 482 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 DIMT1Q9UNQ2 313 aaKnown RBP11.67□□□□□ -0.54
ERBB3-215ENST00000550828 DSCAMO60469 2012 aa11.67□□□□□ -0.54
ERBB3-215ENST00000550828 CHD3Q12873 2000 aaKnown RBP11.67□□□□□ -0.54
ERBB3-215ENST00000550828 IQCMA0A1B0GVH7 501 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 FAM221AA4D161 298 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 C5orf49A4QMS7 147 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 SHISA9B4DS77 424 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ABCD4O14678 606 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 FADS2O95864 444 aaKnown RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 MT-ND2P03891 347 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 CDK1P06493 297 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 PEX19P40855 299 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 GDI2P50395 445 aaKnown RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 PRKXP51817 358 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ACTC1P68032 377 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ACTA1P68133 377 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 IRF3Q14653 427 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 CDONQ4KMG0 1287 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ADAM5Q6NVV9 412 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 SSX8Q7RTT4 187 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 PRSS45Q7RTY3 260 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF101Q8IZC7 436 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF485Q8NCK3 441 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF540Q8NDQ6 660 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 NEUROG1Q92886 237 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 PIK3IP1Q96FE7 263 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 TMEM80Q96HE8 168 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ALG8Q9BVK2 526 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 ISG20L2Q9H9L3 353 aaKnown RBP11.66□□□□□ -0.54
ERBB3-215ENST00000550828 KCNN3Q9UGI6 736 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
ERBB3-215ENST00000550828 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 DAPL1A0PJW8 107 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms