RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MAGEB4O15481 346 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-206ENST00000550406 GPRIN2O60269 458 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 NGFP01138 241 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 LYNP07948 512 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 CCNOP22674 350 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 PCSK6P29122 969 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 OTX1P32242 354 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-206ENST00000550406 OPRL1P41146 370 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 HSPA13P48723 471 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 KRT80Q6KB66 452 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 SLC22A25Q6T423 547 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF101Q8IZC7 436 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 GGHQ92820 318 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF184Q99676 751 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF649Q9BS31 505 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 TTTY10Q9BZA0 68 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 LIME1Q9H400 295 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 POFUT1Q9H488 388 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 CDH20Q9HBT6 801 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 ATPIF1Q9UII2 106 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 LAMP5Q9UJQ1 280 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 MYRFQ9Y2G1 1151 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 ATP23Q9Y6H3 246 aa11.25□□□□□ -0.61
RAB5C-206ENST00000550406 A0A1W2PQL4 384 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-206ENST00000550406 F5H5K5 113 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 PSMD9O00233 223 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 HS3ST1O14792 307 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 XPNPEP2O43895 674 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ICMTO60725 284 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ACSM4P0C7M7 580 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 FAM157BP0CG42 384 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 THBS4P35443 961 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 UCP2P55851 309 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 CXCR4P61073 352 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ERVS71-1P61550 626 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF85Q03923 595 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 POU4F2Q12837 409 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ECH1Q13011 328 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 C6orf141Q5SZD1 244 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 LRRN1Q6UXK5 716 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 RFPL4BQ6ZWI9 263 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 RHOUQ7L0Q8 258 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 TMEM200AQ86VY9 491 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 OR2T27Q8NH04 317 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 NRGNQ92686 78 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 C4orf45Q96LM5 186 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 TBX5Q99593 518 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 KCNJ15Q99712 375 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 KCNS3Q9BQ31 491 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 OR51B6Q9H340 312 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 PLCXD1Q9NUJ7 323 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 UBAP1Q9NZ09 502 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 CISD1Q9NZ45 108 aaKnown RBP11.24□□□□□ -0.61
RAB5C-206ENST00000550406 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 RPL36Q9Y3U8 105 aaKnown RBP11.24□□□□□ -0.61
RAB5C-206ENST00000550406 HECTD1Q9ULT8 2610 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
RAB5C-206ENST00000550406 SNTNA6NMZ2 147 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF878C9JN71 531 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 DENRO43583 198 aaKnown RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 SMPD2O60906 423 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 DANCRP0C864 163 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 PRKXP51817 358 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 GALK2Q01415 458 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 ROM1Q03395 351 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 MVKQ03426 396 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 SNTB2Q13425 540 aaKnown RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF322Q6U7Q0 402 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 COLCA1Q6ZS62 124 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 PRSS45Q7RTY3 260 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 OR10H4Q8NGA5 316 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 TMEM171Q8WVE6 324 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 OR8B4Q96RC9 309 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 DCLRE1CQ96SD1 692 aaKnown RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 MNTQ99583 582 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 DHRS9Q9BPW9 319 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 FGF20Q9NP95 211 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 MRM2Q9UI43 246 aaKnown RBP11.23□□□□□ -0.61
RAB5C-206ENST00000550406 STARD10Q9Y365 291 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
RAB5C-206ENST00000550406 TMEM129A0AVI4 362 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF670-ZNF695F2Z2N8 137 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 M0R135 149 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ABHD16AO95870 558 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 CD8AP01732 235 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 IGHA1P01876 353 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 H2BFMP0C1H6 154 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 GLRXP35754 106 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ATP6V1E1P36543 226 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 GRB2P62993 217 aaKnown RBP11.22□□□□□ -0.61
RAB5C-206ENST00000550406 RAB40BQ12829 278 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 CHD3Q12873 2000 aaKnown RBP11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ADIPOQQ15848 244 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms