RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 SLC25A43Q8WUT9 341 aaPredicted RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 MIXL1Q9H2W2 232 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 OR6C76A6NM76 312 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 GPR171O14626 319 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 ACAA2P42765 397 aaKnown RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 C6orf15Q6UXA7 325 aaPredicted RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 SULF2Q8IWU5 870 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 GTPBP8Q8N3Z3 284 aaPredicted RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 TM4SF19Q96DZ7 209 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 GDF2Q9UK05 429 aaPredicted RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 EXOGQ9Y2C4 368 aaKnown RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 LOC102725191A0A1B0GVB3 256 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 SEMA7AO75326 666 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 GNMTQ14749 295 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 OPCMLQ14982 345 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 OR8B4Q96RC9 309 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 PPA2Q9H2U2 334 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 TMEM184BQ9Y519 407 aaPredicted RBP13.51□□□□□ -0.25
CUX1-214ENST00000550008 RER1O15258 196 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 SGCEO43556 437 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 RAB2AP61019 212 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ANKRD37Q7Z713 158 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 TSNAXQ99598 290 aaKnown RBP13.5□□□□□ -0.25
CUX1-214ENST00000550008 DEFB127Q9H1M4 99 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 FTCDNL1E5RQL4 147 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 B4GALT1P15291 398 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ACHEP22303 614 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 PLEKHN1Q494U1 663 aaPredicted RBP13.5□□□□□ -0.25
CUX1-214ENST00000550008 DHRS13Q6UX07 377 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 SHISA5Q8N114 240 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 TCEAL3Q969E4 200 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 OR14J1Q9UGF5 321 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ANKRD34BA5PLL1 514 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 STK17BO94768 372 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 RAF1P04049 648 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 PET100P0DJ07 73 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 CD46P15529 392 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 FUT7Q11130 342 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 DOC2BQ14184 412 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.5□□□□□ -0.25
CUX1-214ENST00000550008 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ZSCAN4Q8NAM6 433 aaPredicted RBP13.5□□□□□ -0.25
CUX1-214ENST00000550008 OR1M1Q8NGA1 313 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 OR56B1Q8NGI3 324 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ZC3H10Q96K80 434 aaKnown RBP13.5□□□□□ -0.25
CUX1-214ENST00000550008 TWSG1Q9GZX9 223 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 BDP1A6H8Y1 2624 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 MSR1P21757 451 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 LTBRP36941 435 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ATP1B3P54709 279 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 EGR3Q06889 387 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 WIPI1Q5MNZ9 446 aaPredicted RBP13.5□□□□□ -0.25
CUX1-214ENST00000550008 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
CUX1-214ENST00000550008 ARGFXA6NJG6 315 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 FBXO24O75426 580 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 GNB3P16520 340 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 CD53P19397 219 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 RFX2P48378 723 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 FIP1L1Q6UN15 594 aaKnown RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 OR4S1Q8NGB4 309 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 MRGPRX4Q96LA9 322 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 PBOV1Q9GZY1 135 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 PLA2G3Q9NZ20 509 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 M0R135 149 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 NFYAP23511 347 aaPredicted RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 OPRM1P35372 400 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 RPL35P42766 123 aaKnown RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 ZNF121P58317 390 aaPredicted RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 CNN3Q15417 329 aaKnown RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 C17orf107Q6ZR85 190 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 AKR7LQ8NHP1 331 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 CMBLQ96DG6 245 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 LRFN5Q96NI6 719 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 RAB22AQ9UL26 194 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 ICMTO60725 284 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 LIMS1P48059 325 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 VHLLQ6RSH7 139 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 ATG4DQ86TL0 474 aaPredicted RBP13.49□□□□□ -0.25
CUX1-214ENST00000550008 STOML3Q8TAV4 291 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 R4GMQ9 66 aa13.49□□□□□ -0.25
CUX1-214ENST00000550008 ANKRD30BLA7E2S9 258 aa13.48□□□□□ -0.25
CUX1-214ENST00000550008 YKT6O15498 198 aa13.48□□□□□ -0.25
CUX1-214ENST00000550008 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
CUX1-214ENST00000550008 MESTQ5EB52 335 aa13.48□□□□□ -0.25
CUX1-214ENST00000550008 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
CUX1-214ENST00000550008 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
CUX1-214ENST00000550008 UNQ6126/PRO20091Q6UXV3 157 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms