RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 IL1RAPQ9NPH3 570 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 RPRD1BQ9NQG5 326 aaKnown RBP13.82□□□□□ -0.2
VPS29-207ENST00000549970 G6PC2Q9NQR9 355 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 NDE1Q9NXR1 346 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 PTTG3PQ9NZH4 202 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 NPTNQ9Y639 398 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 DYSFO75923 2080 aa13.82□□□□□ -0.2
VPS29-207ENST00000549970 ARHGAP32A7KAX9 2087 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 LOC105371242A0A075B767 164 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 ARPC3O15145 178 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 AVPP01185 164 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 HLXQ14774 488 aaPredicted RBP13.81□□□□□ -0.2
VPS29-207ENST00000549970 PGM2L1Q6PCE3 622 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 SDR9C7Q8NEX9 313 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 ITLN1Q8WWA0 313 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 PTP4A1Q93096 173 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 HAVCR1Q96D42 359 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 FN3KQ9H479 309 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 ATPIF1Q9UII2 106 aa13.81□□□□□ -0.2
VPS29-207ENST00000549970 A0A0G2JMP0 313 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 A0A0X1KG70 313 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 RGS9O75916 674 aaPredicted RBP13.8□□□□□ -0.2
VPS29-207ENST00000549970 SBK2P0C263 348 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 RAC2P15153 192 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 TNFRSF1AP19438 455 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 GSSP48637 474 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 RGS6P49758 472 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 HIST1H3AP68431 136 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 TSPAN31Q12999 210 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 CLEC12AQ5QGZ9 265 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 SLC35F1Q5T1Q4 408 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 HIST2H3PS2Q5TEC6 136 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 DCAF12L2Q5VW00 463 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 PGBD2Q6P3X8 592 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 ZNF620Q6ZNG0 422 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
VPS29-207ENST00000549970 HIST2H3AQ71DI3 136 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 LINC00346Q8IVM7 164 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 SLC26A10Q8NG04 563 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 OR4M2Q8NGB6 313 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 OR5L1Q8NGL2 311 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 GNPDA2Q8TDQ7 276 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 COQ7Q99807 217 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 TMPRSS13Q9BYE2 586 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 HDHD2Q9H0R4 259 aa13.8□□□□□ -0.2
VPS29-207ENST00000549970 OR6C68A6NDL8 312 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 J3QW42 95 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 HLA-DQA2P01906 255 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 ATP6V1B2P21281 511 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 LCN2P80188 198 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 COX10Q12887 443 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 SCGB2A2Q13296 93 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 OR2T2Q6IF00 324 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 CFAP77Q6ZQR2 320 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 ZBTB46Q86UZ6 589 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 ATG16L2Q8NAA4 619 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 OR9Q2Q8NGE9 314 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 OR52E2Q8NGJ4 325 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 ST7LQ8TDW4 575 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 APOBEC3DQ96AK3 386 aaPredicted RBP13.79□□□□□ -0.2
VPS29-207ENST00000549970 OR2V2Q96R30 315 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 CDADC1Q9BWV3 514 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 EGLN3Q9H6Z9 239 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 IL19Q9UHD0 177 aa13.79□□□□□ -0.2
VPS29-207ENST00000549970 F5H5K5 113 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 SURF4O15260 269 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 VENTXO95231 258 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 ADRA2CP18825 462 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 EPHA1P21709 976 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS29-207ENST00000549970 SLC36A3Q495N2 470 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 SPATS1Q496A3 300 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 SLC18B1Q6NT16 456 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 FBXW12Q6X9E4 464 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 TEX29Q8N6K0 151 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 OR10AD1Q8NGE0 317 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 OR2AJ1Q8NGZ0 328 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 PITX2Q99697 317 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 WDR76Q9H967 626 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 LYVE1Q9Y5Y7 322 aa13.78□□□□□ -0.2
VPS29-207ENST00000549970 B2RBV5 119 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 J3QLI3 93 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 IDH3BO43837 385 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 KRT36O76013 467 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 MNAT1P51948 309 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 BTG1P62324 171 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.21
VPS29-207ENST00000549970 SPICQ8N5J4 248 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 FITM2Q8N6M3 262 aa13.77□□□□□ -0.21
VPS29-207ENST00000549970 CYB561A3Q8NBI2 242 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms