RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 OR52L1Q8NGH7 329 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 GIPC3Q8TF64 312 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 RDH5Q92781 318 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 CMBLQ96DG6 245 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 RBM4Q9BWF3 364 aaKnown RBP8.32□□□□□ -1.08
HDAC7-229ENST00000549883 DGCR6LQ9BY27 220 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 WDR76Q9H967 626 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 NTN4Q9HB63 628 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 PTTG3PQ9NZH4 202 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
HDAC7-229ENST00000549883 FBXO9Q9UK97 447 aaPredicted RBP8.32□□□□□ -1.08
HDAC7-229ENST00000549883 NDRG4Q9ULP0 352 aaKnown RBP8.32□□□□□ -1.08
HDAC7-229ENST00000549883 FAM183AA6NL82 134 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 FKBP6O75344 327 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 TIPRLO75663 272 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 IGFBP5P24593 272 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 ZNF81P51508 661 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 SELENOVP59797 346 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 KRTAP27-1Q3LI81 207 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 SLC36A3Q495N2 470 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 ACSM5Q6NUN0 579 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 DNM1P34Q6PK57 102 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 ZNF771Q7L3S4 317 aaPredicted RBP8.31□□□□□ -1.08
HDAC7-229ENST00000549883 HIPK1Q86Z02 1210 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 OR5AS1Q8N127 324 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 LINC00471Q8N535 108 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 PROKR2Q8NFJ6 384 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 CLDND2Q8NHS1 167 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 SNX33Q8WV41 574 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 NMNAT2Q9BZQ4 307 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 CHODLQ9H9P2 273 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 ELOVL3Q9HB03 270 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 PDP1Q9P0J1 537 aaPredicted RBP8.31□□□□□ -1.08
HDAC7-229ENST00000549883 CYB5R1Q9UHQ9 305 aa8.31□□□□□ -1.08
HDAC7-229ENST00000549883 PURGQ9UJV8 347 aaKnown RBP8.31□□□□□ -1.08
HDAC7-229ENST00000549883 WNK2Q9Y3S1 2297 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 LOC100289279A0A1B0GTE1 492 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 FAM157AC9JC47 383 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 PPIHO43447 177 aaKnown RBP8.3□□□□□ -1.08
HDAC7-229ENST00000549883 TIMM8AO60220 97 aaPredicted RBP8.3□□□□□ -1.08
HDAC7-229ENST00000549883 TGFAP01135 160 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 ACSM4P0C7M7 580 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 ACHEP22303 614 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 GPR6P46095 362 aaPredicted RBP8.3□□□□□ -1.08
HDAC7-229ENST00000549883 GZMKP49863 264 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 ARHGDIAP52565 204 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 CHN2P52757 468 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 CBX1P83916 185 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 MVKQ03426 396 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 LINC01590Q5TEZ4 76 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 TMEM236Q5W0B7 351 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 RPL13AP3Q6NVV1 102 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 CD300LDQ6UXZ3 194 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 PAPD5Q8NDF8 572 aaKnown RBP8.3□□□□□ -1.08
HDAC7-229ENST00000549883 GJC3Q8NFK1 279 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 OR2T4Q8NH00 348 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 PTP4A1Q93096 173 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 HAVCR1Q96D42 359 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 PITX2Q99697 317 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 MDFIQ99750 246 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 COQ7Q99807 217 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 WACQ9BTA9 647 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 NKIRAS2Q9NYR9 191 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 COMMD3-BMI1R4GMX3 469 aa8.3□□□□□ -1.08
HDAC7-229ENST00000549883 IGHV1-69-2A0A0G2JMI3 117 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 F5H5K5 113 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 H0YL77 283 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 GNGT2O14610 69 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 TPD52L2O43399 206 aaKnown RBP8.29□□□□□ -1.08
HDAC7-229ENST00000549883 LMX1BO60663 402 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 E2F6O75461 281 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 SPI1P17947 270 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 GSTM3P21266 225 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 POU1F1P28069 291 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 CRYBB2P43320 205 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 LMO4P61968 165 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 CDK5R2Q13319 367 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 PCGF3Q3KNV8 242 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 OR2T2Q6IF00 324 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 COLCA1Q6ZS62 124 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 SPATC1Q76KD6 591 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 ZNF540Q8NDQ6 660 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 OR2T33Q8NG76 320 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 UTP4Q969X6 686 aaKnown RBP8.29□□□□□ -1.08
HDAC7-229ENST00000549883 AMELYQ99218 206 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 ATF6BQ99941 703 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 HDHD2Q9H0R4 259 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 SAP30LQ9HAJ7 183 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 LPAR2Q9HBW0 351 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 CMC2Q9NRP2 79 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 DECR2Q9NUI1 292 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 DNAJB9Q9UBS3 223 aa8.29□□□□□ -1.08
HDAC7-229ENST00000549883 GPR160Q9UJ42 338 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms