RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZNF441Q8N8Z8 693 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 OR1J2Q8NGS2 313 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 VN1R1Q9GZP7 353 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 COMMD4Q9H0A8 199 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 IFT46Q9NQC8 304 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 FSCN3Q9NQT6 498 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 VSX1Q9NZR4 365 aaPredicted RBP9.94□□□□□ -0.82
LINC00661-204ENST00000549354 ICAM5Q9UMF0 924 aa9.94□□□□□ -0.82
LINC00661-204ENST00000549354 RPH3AQ9Y2J0 694 aaPredicted RBP9.94□□□□□ -0.82
LINC00661-204ENST00000549354 COA3Q9Y2R0 106 aaPredicted RBP9.94□□□□□ -0.82
LINC00661-204ENST00000549354 PI4KAP42356 2102 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 CTDSPLO15194 276 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 GPRIN2O60269 458 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 CTAG2O75638 210 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 HTR3BO95264 441 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 TACSTD2P09758 323 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 GPR143P51810 404 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 WDR38Q5JTN6 314 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 ZNF385CQ66K41 422 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 STEAP1BQ6NZ63 245 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 UNQ9370/PRO34162Q6UXP9 181 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 DPY19L2P2Q6ZN68 376 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 ESX1Q8N693 406 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 RNF166Q96A37 237 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 PNPLA2Q96AD5 504 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 LCORQ96JN0 433 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 AIFM2Q9BRQ8 373 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 NUDT9Q9BW91 350 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 UBQLN4Q9NRR5 601 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 ZNF337Q9Y3M9 751 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 RALGAPA1Q6GYQ0 2036 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 CPED1A4D0V7 1026 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 GDF9O60383 454 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 RAB3DO95716 219 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 F10P00742 488 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 RAB40ALP0C0E4 278 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 SFTPDP35247 375 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 FAUP35544 74 aaKnown RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 DNASE1L1P49184 302 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 MFGE8Q08431 387 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 ZNF528Q3MIS6 628 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 PRSS35Q8N3Z0 413 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 SPICQ8N5J4 248 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 STEAP2Q8NFT2 490 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 RAB40AQ8WXH6 277 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 SLC39A7Q92504 469 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 DAZLQ92904 295 aaKnown RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 FAM3DQ96BQ1 224 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 C8orf44Q96CB5 159 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 SLC25A44Q96H78 314 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-204ENST00000549354 SOX7Q9BT81 388 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 ZCCHC4Q9H5U6 513 aa9.93□□□□□ -0.82
LINC00661-204ENST00000549354 A0A087WUJ7 227 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 C5orf51A6NDU8 294 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 D6RAR5 112 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 H7C417 338 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 OR2A4O95047 310 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 UTS2O95399 124 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 MC2RQ01718 297 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 TOMM20Q15388 145 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 MESTQ5EB52 335 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 C3orf33Q6P1S2 294 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 TMEM200AQ86VY9 491 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 ZNF101Q8IZC7 436 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 TMEM105Q8N8V8 129 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 DTWD2Q8NBA8 298 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 MRPS24Q96EL2 167 aaKnown RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 BANF2Q9H503 90 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 GSKIPQ9P0R6 139 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 MTFP1Q9UDX5 166 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 RABL2BQ9UNT1 228 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 FER1L5A0AVI2 2057 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 IGKV1D-42A0A075B6H8 117 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 GPR31O00270 319 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 NTN3O00634 580 aaPredicted RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CER1O95813 267 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CTLA4P16410 223 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CDAP32320 146 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 ZNF169Q14929 603 aaPredicted RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 EBPQ15125 230 aaKnown RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 ACKR1Q16570 336 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 ELFN2Q5R3F8 820 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 HDDC2Q7Z4H3 204 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 LRRTM1Q86UE6 522 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 EID2Q8N6I1 236 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 OR1N1Q8NGS0 311 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 GPR148Q8TDV2 347 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 TSPAN32Q96QS1 320 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 VSTM2BA6NLU5 285 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 XRCC3O43542 346 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 HLA-AP01891 365 aaKnown RBP9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CD14P08571 375 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CYC1P08574 325 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 OR4E1P0C645 316 aa9.92□□□□□ -0.82
LINC00661-204ENST00000549354 CPN1P15169 458 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms