RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FTMTQ8N4E7 242 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 OR52H1Q8NGJ2 320 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ANKRD49Q8WVL7 239 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 DNAJA4Q8WW22 397 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 MAIP1Q8WWC4 291 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 PHYHIPLQ96FC7 376 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 COPS8Q99627 209 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 SLC39A3Q9BRY0 314 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 DDA1Q9BW61 102 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 TM6SF2Q9BZW4 377 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 PKIBQ9C010 78 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ZYG11BQ9C0D3 744 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 NIPAL2Q9H841 368 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 NHEJ1Q9H9Q4 299 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 SLC39A1Q9NY26 324 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 BTNL2Q9UIR0 455 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 IFT52Q9Y366 437 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 COQ4Q9Y3A0 265 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 RPL36Q9Y3U8 105 aaKnown RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ATP6V1DQ9Y5K8 247 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 DOCK8Q8NF50 2099 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ANKRD11Q6UB99 2663 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ZZEF1O43149 2961 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 MYO10Q9HD67 2058 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 VWA8A3KMH1 1905 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 A0A0D9SEW6 157 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 A0A1B0GVL5 298 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 FAM240BA0A1B0GVZ2 78 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 A0A1W2PNU3 283 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR52A4PA6NMU1 304 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 LOC110117498-PIK3R3F6TDL0 507 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 H0YIV9 168 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 BOLA2-SMG1P6H3BVE0 249 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 FOXE1O00358 373 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 RAD51BO15315 384 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 FGFR1OPO95684 399 aaKnown RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 IGLV3-25P01717 112 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 KRT7P08729 469 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 DNAH10OSP0CZ25 163 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 ELK1P19419 428 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 NCF2P19878 526 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 SUCLG1P53597 346 aaKnown RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 APOC4P55056 127 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 PKNOX1P55347 436 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 RHOAP61586 193 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 CDK16Q00536 496 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 GNA12Q03113 381 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 CDC20Q12834 499 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 SRSF6Q13247 344 aaKnown RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OXA1LQ15070 435 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 IRF4Q15306 451 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 DEFB109BQ30KR1 87 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 PARP15Q460N3 678 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 BCL7AQ4VC05 210 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 C6orf226Q5I0X4 101 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 SPECC1LQ69YQ0 1117 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR52E8Q6IFG1 317 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 ERI1Q8IV48 349 aaKnown RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 PRR22Q8IZ63 422 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR10G3Q8NGC4 313 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR4K14Q8NGD5 310 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR56A4Q8NGH8 313 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR51S1Q8NGJ8 323 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR6K2Q8NGY2 324 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 NEIL3Q8TAT5 605 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 AGR3Q8TD06 166 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 UFD1Q92890 307 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 ISG20Q96AZ6 181 aaKnown RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 RASD2Q96D21 266 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 SLC35E1Q96K37 410 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 IMMP1LQ96LU5 166 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 CLCC1Q96S66 551 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 KLF6Q99612 283 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 TCEAL2Q9H3H9 227 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-216ENST00000548379 RDH14Q9HBH5 336 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 CRLF2Q9HC73 371 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 POLE4Q9NR33 117 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 ETNK2Q9NVF9 386 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 OR51B4Q9Y5P0 310 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 CDH10Q9Y6N8 788 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 V9GY05 133 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 IGF2RP11717 2491 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 PCDH15Q96QU1 1955 aa2.8□□□□□ -1.96
PTCH1-216ENST00000548379 ITPR1Q14643 2758 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 SPTBN2O15020 2390 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 F5P12259 2224 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TCRBV9S1A1TA0A576 114 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 POLR1CO15160 346 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 EMC8O43402 210 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 UGT1A9O60656 530 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 DUX4L4P0CJ87 422 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 CCL4P13236 92 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 GABRR1P24046 479 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 CASP14P31944 242 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms