RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MSMPQ1L6U9 139 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 KLHL12Q53G59 568 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 SHEQ5VZ18 495 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 VHLLQ6RSH7 139 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 COLCA1Q6ZS62 124 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 DPY19L4Q7Z388 723 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 DCXRQ7Z4W1 244 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 GID4Q8IVV7 300 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 OR10S1Q8NGN2 331 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 OR1J1Q8NGS3 322 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 OTOSQ8NHW6 89 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 ZMYND19Q96E35 227 aaPredicted RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 MARS2Q96GW9 593 aaKnown RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
DDX54-203ENST00000546869 YIPF3Q9GZM5 350 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 TOR3AQ9H497 397 aa12.44□□□□□ -0.42
DDX54-203ENST00000546869 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 ABHD16AO95870 558 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 NGFP01138 241 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 IGHV3-13P01766 116 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 SPARCP09486 303 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 PSKH1P11801 424 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 SLC15A1P46059 708 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 RPS7P62081 194 aaKnown RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 SNRPGP62308 76 aaKnown RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 TRIP10Q15642 601 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 ZNF718Q3SXZ3 478 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 OGFRL1Q5TC84 451 aaPredicted RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 SLC16A9Q7RTY1 509 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 ERI1Q8IV48 349 aaKnown RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 SYNPRQ8TBG9 265 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 RNF133Q8WVZ7 376 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 APOBEC3DQ96AK3 386 aaPredicted RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 SLAMF6Q96DU3 332 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 IL4I1Q96RQ9 567 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 MNTQ99583 582 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 CACNG6Q9BXT2 260 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 MS4A5Q9H3V2 200 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 FAM118AQ9NWS6 357 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 SMPD3Q9NY59 655 aaPredicted RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 SLCO1C1Q9NYB5 712 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 WARS2Q9UGM6 360 aaKnown RBP12.43□□□□□ -0.42
DDX54-203ENST00000546869 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
DDX54-203ENST00000546869 CCDC168Q8NDH2 2452 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 DLGAP1O14490 977 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 MPZL2O60487 215 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 DBHP09172 617 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ACSM4P0C7M7 580 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ALOX5APP20292 161 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 CDKN1AP38936 164 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 RPS27P42677 84 aaKnown RBP12.42□□□□□ -0.42
DDX54-203ENST00000546869 TPTEP56180 551 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 PPP1CBP62140 327 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 EIF2B1Q14232 305 aaKnown RBP12.42□□□□□ -0.42
DDX54-203ENST00000546869 OCLNQ16625 522 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ZIK1Q3SY52 487 aaPredicted RBP12.42□□□□□ -0.42
DDX54-203ENST00000546869 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 OR5L1Q8NGL2 311 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 OR6N2Q8NGY6 317 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ABHD4Q8TB40 342 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 KLF14Q8TD94 323 aaPredicted RBP12.42□□□□□ -0.42
DDX54-203ENST00000546869 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 RFKQ969G6 155 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 SPTSSAQ969W0 71 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ABHD6Q9BV23 337 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 GPR160Q9UJ42 338 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 ITGB1BP2Q9UKP3 347 aa12.42□□□□□ -0.42
DDX54-203ENST00000546869 LOC100130705A0A1B0GUX0 176 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 F12P00748 615 aaPredicted RBP12.41□□□□□ -0.42
DDX54-203ENST00000546869 APOC1P02654 83 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 LYNP07948 512 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 GCH1P30793 250 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 HTR1FP30939 366 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 LIPAP38571 399 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 ATP5J2P56134 94 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 KLF3P57682 345 aaPredicted RBP12.41□□□□□ -0.42
DDX54-203ENST00000546869 ERVS71-1P61550 626 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
DDX54-203ENST00000546869 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 POU4F2Q12837 409 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 DRAM2Q6UX65 266 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 LRP11Q86VZ4 500 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 FAM81AQ8TBF8 368 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 SLC25A40Q8TBP6 338 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 OR2J1Q9GZK6 312 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 IMPAD1Q9NX62 359 aa12.41□□□□□ -0.42
DDX54-203ENST00000546869 CGGBP1Q9UFW8 167 aaPredicted RBP12.41□□□□□ -0.42
DDX54-203ENST00000546869 DUSP13Q9UII6 198 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms