RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CENPAP49450 140 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 ZNF81P51508 661 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 PPP1R8Q12972 351 aaKnown RBP13.03□□□□□ -0.32
SSH1-204ENST00000546697 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 OR4Q3Q8NH05 313 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 GIPC3Q8TF64 312 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 PTP4A1Q93096 173 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 APOBEC3DQ96AK3 386 aaPredicted RBP13.03□□□□□ -0.32
SSH1-204ENST00000546697 SLCO4A1Q96BD0 722 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 NRBF2Q96F24 287 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 FEVQ99581 238 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 NIPSNAP1Q9BPW8 284 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 SOX7Q9BT81 388 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 CADM1Q9BY67 442 aaKnown RBP13.03□□□□□ -0.32
SSH1-204ENST00000546697 OR51B6Q9H340 312 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 MMADHCQ9H3L0 296 aaPredicted RBP13.03□□□□□ -0.32
SSH1-204ENST00000546697 MARCH7Q9H992 704 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
SSH1-204ENST00000546697 CDC42EP3Q9UKI2 254 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 STARD10Q9Y365 291 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 U3KQV3 271 aa13.03□□□□□ -0.32
SSH1-204ENST00000546697 TANC2Q9HCD6 1990 aa13.02□□□□□ -0.32
SSH1-204ENST00000546697 LYNX1G3V0Z9 82 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 ATP5HO75947 161 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 GPANK1O95872 356 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 LYNX1P0DP58 116 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 BLVRAP53004 296 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 CDH15P55291 814 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 CCL8P80075 99 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 FLOT2Q14254 428 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 MEP1BQ16820 701 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 CLEC12AQ5QGZ9 265 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 SLC35F1Q5T1Q4 408 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 LINC01590Q5TEZ4 76 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 CFAP77Q6ZQR2 320 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 ZNRF4Q8WWF5 429 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 SLC7A6Q92536 515 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
SSH1-204ENST00000546697 TSSK6Q9BXA6 273 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 POFUT1Q9H488 388 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 YY1AP1Q9H869 796 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 YAE1D1Q9NRH1 226 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 DNAJB9Q9UBS3 223 aa13.02□□□□□ -0.33
SSH1-204ENST00000546697 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 LMX1BO60663 402 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 DBHP09172 617 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 ACSM4P0C7M7 580 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 ZNF16P17020 682 aaPredicted RBP13.01□□□□□ -0.33
SSH1-204ENST00000546697 GRK5P34947 590 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 GPR6P46095 362 aaPredicted RBP13.01□□□□□ -0.33
SSH1-204ENST00000546697 RASSF2P50749 326 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 LMO4P61968 165 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 CRMP1Q14194 572 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 TRIP10Q15642 601 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 FAM166AQ6J272 317 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 Q6ZR03 302 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 OR5L1Q8NGL2 311 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
SSH1-204ENST00000546697 UTP4Q969X6 686 aaKnown RBP13.01□□□□□ -0.33
SSH1-204ENST00000546697 ELMOD3Q96FG2 381 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 MAP6Q96JE9 813 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 ATF6BQ99941 703 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 RERGLQ9H628 205 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 SAP30LQ9HAJ7 183 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 COMMD3-BMI1R4GMX3 469 aa13.01□□□□□ -0.33
SSH1-204ENST00000546697 LRP5LA4QPB2 252 aa13□□□□□ -0.33
SSH1-204ENST00000546697 FKBP6O75344 327 aa13□□□□□ -0.33
SSH1-204ENST00000546697 FSTL3O95633 263 aa13□□□□□ -0.33
SSH1-204ENST00000546697 FAM157CP0CG43 387 aa13□□□□□ -0.33
SSH1-204ENST00000546697 ANXA8P13928 327 aa13□□□□□ -0.33
SSH1-204ENST00000546697 SPI1P17947 270 aa13□□□□□ -0.33
SSH1-204ENST00000546697 IGFBP5P24593 272 aa13□□□□□ -0.33
SSH1-204ENST00000546697 IL2RGP31785 369 aa13□□□□□ -0.33
SSH1-204ENST00000546697 CDK5Q00535 292 aa13□□□□□ -0.33
SSH1-204ENST00000546697 CARTPTQ16568 116 aa13□□□□□ -0.33
SSH1-204ENST00000546697 ALKBH6Q3KRA9 238 aa13□□□□□ -0.33
SSH1-204ENST00000546697 OTPQ5XKR4 325 aa13□□□□□ -0.33
SSH1-204ENST00000546697 LINC01356Q8N9X3 169 aa13□□□□□ -0.33
SSH1-204ENST00000546697 CYB561A3Q8NBI2 242 aa13□□□□□ -0.33
SSH1-204ENST00000546697 ICA1LQ8NDH6 482 aa13□□□□□ -0.33
SSH1-204ENST00000546697 CLDND2Q8NHS1 167 aa13□□□□□ -0.33
SSH1-204ENST00000546697 FN3KQ9H479 309 aa13□□□□□ -0.33
SSH1-204ENST00000546697 ARMC1Q9NVT9 282 aa13□□□□□ -0.33
SSH1-204ENST00000546697 IL19Q9UHD0 177 aa13□□□□□ -0.33
SSH1-204ENST00000546697 POLR1DQ9Y2S0 133 aa13□□□□□ -0.33
SSH1-204ENST00000546697 GRIP1Q9Y3R0 1128 aa13□□□□□ -0.33
SSH1-204ENST00000546697 COL6A5A8TX70 2615 aa13□□□□□ -0.33
SSH1-204ENST00000546697 LOC100289279A0A1B0GTE1 492 aa12.99□□□□□ -0.33
SSH1-204ENST00000546697 IQCF6A8MYZ5 107 aa12.99□□□□□ -0.33
SSH1-204ENST00000546697 SOX14O95416 240 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms