RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 OCSTAMPQ9BR26 566 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 RLIMQ9NVW2 624 aa7.81□□□□□ -1.16
CLIP1-218ENST00000545889 SLC22A23A1A5C7 686 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR2W5A6NFC9 320 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 F5H0A9 414 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ARPC5O15511 151 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CREBL2O60519 120 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 MBP02144 154 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 WNT1P04628 370 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 FURINP09958 794 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CD82P27701 267 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 HLA-DMAP28067 261 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SNRPEP62304 92 aaKnown RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RNF4P78317 190 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 AKR1C1Q04828 323 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CLLU1Q5K131 121 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR6S1Q8NH40 331 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR52N1Q8NH53 320 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SLC38A5Q8WUX1 472 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 YIPF5Q969M3 257 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 NKX3-1Q99801 234 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 NKX6-2Q9C056 277 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ESRP2Q9H6T0 727 aaKnown RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RASD1Q9Y272 281 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RNF212BA8MTL3 300 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 LGI1O95970 557 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ADRB1P08588 477 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 KCNJ3P48549 501 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SLC35A2P78381 396 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OPCMLQ14982 345 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 AADACL3Q5VUY0 350 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SAXO2Q658L1 398 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RTL6Q6ICC9 239 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 JMJD6Q6NYC1 403 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 Q6ZPB1 254 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 TMPRSS7Q7RTY8 843 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 TSPYL5Q86VY4 417 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR1M1Q8NGA1 313 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 C16orf52Q8NHV5 167 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 EMG1Q92979 244 aaKnown RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RBFOX1Q9NWB1 397 aaKnown RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 C19orf53Q9UNZ5 99 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 POLDIP2Q9Y2S7 368 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR2A25A4D2G3 310 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 M0R036 132 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 TMPRSS11DO60235 418 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ADAM11O75078 769 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR8U9P0C7N5 309 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CCL4P13236 92 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 MAKP20794 623 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RFX2P48378 723 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 GSK3AP49840 483 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 PRAMEF9Q5VWM5 478 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 DND1Q8IYX4 353 aaKnown RBP7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ADGRF3Q8IZF5 1079 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ST8SIA1Q92185 356 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CLMPQ9H6B4 373 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CXorf36Q9H7Y0 433 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 C5orf49A4QMS7 147 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CD3EP07766 207 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 GUSBP08236 651 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SLC2A1P11166 492 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 KITLGP21583 273 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 GIPRP48546 466 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 PNLIPRP2P54317 469 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ARL16Q0P5N6 197 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 TIGD3Q6B0B8 471 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 GPR155Q7Z3F1 870 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR10X1Q8NGY0 326 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 RNF128Q8TEB7 428 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 TCTEX1D2Q8WW35 142 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 ROBO4Q8WZ75 1007 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 STACQ99469 402 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SARGQ9BW04 601 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 SLC25A18Q9H1K4 315 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 OR51J1Q9H342 316 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 CHST11Q9NPF2 352 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 MOKQ9UQ07 419 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 FBXO7Q9Y3I1 522 aa7.8□□□□□ -1.16
CLIP1-218ENST00000545889 A0A1B0GV90 55 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 RAB3DO95716 219 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 FOLR1P15328 257 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF83P51522 516 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SOX8P57073 446 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 BLOC1S1P78537 153 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 GAB1Q13480 694 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 DUSP5Q16690 384 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 CNIH2Q6PI25 160 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 GSG1LQ6UXU4 331 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 FBXW12Q6X9E4 464 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OR8D4Q8NGM9 314 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 CPNE4Q96A23 557 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 DUSP15Q9H1R2 295 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 METTL17Q9H7H0 456 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ZFP64Q9NPA5 681 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OSGIN2Q9Y236 505 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 A0A087WZY1 265 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms