RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 OR51B6Q9H340 312 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 ESRP2Q9H6T0 727 aaKnown RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 PAK1IP1Q9NWT1 392 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 EXOGQ9Y2C4 368 aaKnown RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 IQCMA0A1B0GVH7 501 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 NGFP01138 241 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 OTX1P32242 354 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 OPRL1P41146 370 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 ERVS71-1P61550 626 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 TMED1Q13445 227 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 LRRN1Q6UXK5 716 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 OR52I1Q8NGK6 324 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 Q96MT0 163 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 HDHD2Q9H0R4 259 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 CENPMQ9NSP4 180 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 MRPS18AQ9NVS2 196 aaKnown RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 SLCO1C1Q9NYB5 712 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 LAMP5Q9UJQ1 280 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 GPRIN2O60269 458 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 CD3EP07766 207 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 NKX6-1P78426 367 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-217ENST00000545738 PLP2Q04941 152 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 DOC2BQ14184 412 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 TMEM255AQ5JRV8 349 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 C6orf141Q5SZD1 244 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 KRT80Q6KB66 452 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-217ENST00000545738 PLEKHG7Q6ZR37 379 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 RFPL4BQ6ZWI9 263 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 ALDH16A1Q8IZ83 802 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 BPIFB6Q8NFQ5 453 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 OR10H4Q8NGA5 316 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 GGHQ92820 318 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 COQ7Q99807 217 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 POFUT1Q9H488 388 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 RNF115Q9Y4L5 304 aa14.06□□□□□ -0.16
LIMS2-217ENST00000545738 SLC1A7O00341 560 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 DENRO43583 198 aaKnown RBP14.05□□□□□ -0.16
LIMS2-217ENST00000545738 TMCC2O75069 709 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 FAM157BP0CG42 384 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 COX5BP10606 129 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 APLNRP35414 380 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 NR1H2P55055 460 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 GALK2Q01415 458 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 TLE4Q04727 773 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF684Q5T5D7 378 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 SLC22A25Q6T423 547 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF454Q8N9F8 522 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 NRGNQ92686 78 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-217ENST00000545738 SLC24A3Q9HC58 644 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 MRM2Q9UI43 246 aaKnown RBP14.05□□□□□ -0.16
LIMS2-217ENST00000545738 RPL36Q9Y3U8 105 aaKnown RBP14.05□□□□□ -0.16
LIMS2-217ENST00000545738 PDZD2O15018 2839 aa14.05□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF878C9JN71 531 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 E7EQL1 145 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 F5H5K5 113 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 SMPD2O60906 423 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ABHD16AO95870 558 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 IGHA1P01876 353 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 CRYAAP02489 173 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ACSM4P0C7M7 580 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 SLC2A1P11166 492 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 GDI2P50395 445 aaKnown RBP14.04□□□□□ -0.16
LIMS2-217ENST00000545738 RAB40BQ12829 278 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 POU4F2Q12837 409 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 TBC1D28Q2M2D7 210 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF322Q6U7Q0 402 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-217ENST00000545738 C14orf79Q96F83 325 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 RADILQ96JH8 1075 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 COPS4Q9BT78 406 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 CLEC4MQ9H2X3 399 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PLEKHF2Q9H8W4 249 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 MOV10Q9HCE1 1003 aaKnown RBP14.04□□□□□ -0.16
LIMS2-217ENST00000545738 FKBP14Q9NWM8 211 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PSORS1C1Q9UIG5 152 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ATPIF1Q9UII2 106 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 LRP12Q9Y561 859 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 AKAP9Q99996 3911 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ICMTO60725 284 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 OR2T7P0C7T2 308 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 NR4A1P22736 598 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PAX7P23759 505 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ATP6V1E1P36543 226 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PRKXP51817 358 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ROM1Q03395 351 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PRSS45Q7RTY3 260 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 LHFPL3Q86UP9 236 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 OR2T27Q8NH04 317 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 OR8B4Q96RC9 309 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 LIME1Q9H400 295 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 PLCXD1Q9NUJ7 323 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF319Q9P2F9 582 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 GRIP1Q9Y3R0 1128 aa14.04□□□□□ -0.16
LIMS2-217ENST00000545738 LIMS3P0CW19 117 aa14.03□□□□□ -0.16
LIMS2-217ENST00000545738 LIMS4P0CW20 117 aa14.03□□□□□ -0.16
LIMS2-217ENST00000545738 C21orf33P30042 268 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-217ENST00000545738 PRSS12P56730 875 aa14.03□□□□□ -0.16
LIMS2-217ENST00000545738 SNTB2Q13425 540 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms