RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 DPAGT1Q9H3H5 408 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 CTSZQ9UBR2 303 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 FBLN5Q9UBX5 448 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 ATPIF1Q9UII2 106 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 ZNF816-ZNF321PA0A0X1KG74 233 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 IQCF6A8MYZ5 107 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 PRB2P02812 416 aaPredicted RBP12.16□□□□□ -0.46
RTN3-214ENST00000545432 OPN1SWP03999 348 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
RTN3-214ENST00000545432 CRYBA2P53672 197 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 RAD23AP54725 363 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 VSNL1P62760 191 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 SCRN3Q0VDG4 424 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 MAB21L1Q13394 359 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 KRT71Q3SY84 523 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 CLEC12AQ5QGZ9 265 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 MOGAT3Q86VF5 341 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 MREGQ8N565 214 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 LRTOMTQ8WZ04 291 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 CFHR4Q92496 578 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 RASD2Q96D21 266 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
RTN3-214ENST00000545432 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
RTN3-214ENST00000545432 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
RTN3-214ENST00000545432 A0A0U1RQK1 487 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 SGCEO43556 437 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 PTBP3O95758 552 aaKnown RBP12.15□□□□□ -0.46
RTN3-214ENST00000545432 VIMP08670 466 aaKnown RBP12.15□□□□□ -0.46
RTN3-214ENST00000545432 HTR5AP47898 357 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 RGS6P49758 472 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 FHL1Q13642 323 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 HERPUD1Q15011 391 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 FAM189A2Q15884 450 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 ALG10Q5BKT4 473 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 OR2T2Q6IF00 324 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 COLCA1Q6ZS62 124 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 PATL1Q86TB9 770 aaKnown RBP12.15□□□□□ -0.46
RTN3-214ENST00000545432 IGFN1Q86VF2 1251 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 OR5AS1Q8N127 324 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 GALNT4Q8N4A0 578 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 TMEM239Q8WW34 195 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 TAMM41Q96BW9 452 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 DMRTB1Q96MA1 342 aa12.15□□□□□ -0.46
RTN3-214ENST00000545432 F5H5P2 479 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 AHCYL1O43865 530 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 PIP5K1CO60331 668 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 DOK2O60496 412 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 FCN3O75636 299 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 TGFBR2P37173 567 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 SLC18A1P54219 525 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 INTS11Q5TA45 600 aaKnown RBP12.14□□□□□ -0.47
RTN3-214ENST00000545432 METAP1DQ6UB28 335 aaPredicted RBP12.14□□□□□ -0.47
RTN3-214ENST00000545432 CCDC80Q76M96 950 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
RTN3-214ENST00000545432 FAM156AQ8NDB6 213 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 MRAPQ8TCY5 172 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 NPRL2Q8WTW4 380 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
RTN3-214ENST00000545432 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 ERVK-18Q9QC07 812 aa12.14□□□□□ -0.47
RTN3-214ENST00000545432 A6NIZ1 184 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 RNASEK-C17orf49H0YIS7 233 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 NDUFA2O43678 99 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 OR5F1O95221 314 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 CD200P41217 278 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 RAP1BP61224 184 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 LSM6P62312 80 aaKnown RBP12.13□□□□□ -0.47
RTN3-214ENST00000545432 RAP1AP62834 184 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 EGR3Q06889 387 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 AQP6Q13520 282 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
RTN3-214ENST00000545432 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 RASSF5Q8WWW0 418 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 SLC7A6Q92536 515 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 KAT8Q9H7Z6 458 aaKnown RBP12.13□□□□□ -0.47
RTN3-214ENST00000545432 EMC7Q9NPA0 242 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.13□□□□□ -0.47
RTN3-214ENST00000545432 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 ZNRD1Q9P1U0 126 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 RIMS3Q9UJD0 308 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 VPREB3Q9UKI3 123 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
RTN3-214ENST00000545432 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
RTN3-214ENST00000545432 A0A1W2PPL8 197 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 LGALS8O00214 317 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 GZMMP51124 257 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 CTXN1P60606 82 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 STX1BP61266 288 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 RSPO1Q2MKA7 263 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms