RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRIM40Q6P9F5 258 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 CCDC73Q6ZRK6 1079 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 MYPOPQ86VE0 399 aaPredicted RBP3□□□□□ -1.93
SNHG1-222ENST00000545308 MARCH9Q86YJ5 346 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 CD302Q8IX05 232 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 PQLC3Q8N755 202 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF485Q8NCK3 441 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 OR10H4Q8NGA5 316 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 OR1S2Q8NGQ3 325 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 RHOXF1Q8NHV9 184 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF75CPQ92670 426 aaPredicted RBP3□□□□□ -1.93
SNHG1-222ENST00000545308 ATP5SQ99766 215 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 SELENOIQ9C0D9 397 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 MFFQ9GZY8 342 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 OR51M1Q9H341 326 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 TREM2Q9NZC2 230 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 DCDC2Q9UHG0 476 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 MOKQ9UQ07 419 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 ANK1P16157 1881 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 TMEM131Q92545 1883 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 COL5A1P20908 1838 aaPredicted RBP3□□□□□ -1.93
SNHG1-222ENST00000545308 TEP1Q99973 2627 aaKnown RBP3□□□□□ -1.93
SNHG1-222ENST00000545308 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 NID2Q14112 1375 aa3□□□□□ -1.93
SNHG1-222ENST00000545308 NUMA1Q14980 2115 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 PTPN13Q12923 2485 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 OBSL1O75147 1896 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 IGHV3OR16-13A0A075B7E8 117 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 A0A0G2JLM5 398 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 K7EQS6 105 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 LAD1O00515 517 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 CCL21O00585 134 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 CHST1O43916 411 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 LYPLA2O95372 231 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 PLEKHA8P1O95397 391 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 KLF8O95600 359 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 RALBP11234 206 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 KCNE1P15382 129 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TBPP20226 339 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 BCKDHBP21953 392 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TUBG1P23258 451 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 HSD17B2P37059 387 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 NAMPTP43490 491 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 KIR2DS4P43632 304 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 CLDN8P56748 225 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 GPX6P59796 221 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 MRPS22P82650 360 aaKnown RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TGFBR3Q03167 851 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TLE4Q04727 773 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 HADHQ16836 314 aaKnown RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 XKR4Q5GH76 650 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 UTF1Q5T230 341 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 PIP5KL1Q5T9C9 394 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF658Q5TYW1 1059 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 MARC1Q5VT66 337 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TIGD3Q6B0B8 471 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ALKAL1Q6UXT8 129 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 Q6ZN92 141 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF571Q7Z3V5 609 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF546Q86UE3 836 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 GTSCR1Q86UQ5 136 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TMEM252Q8N6L7 170 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF321PQ8N8H1 164 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 FBXL13Q8NEE6 735 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 FAM222BQ8WU58 562 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 NEIL2Q969S2 332 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 XPO6Q96QU8 1125 aaKnown RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 SORT1Q99523 831 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 SLC29A1Q99808 456 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 NAT9Q9BTE0 207 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 UGT1A10Q9HAW8 530 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 FGF20Q9NP95 211 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 ADAP2Q9NPF8 381 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TUBG2Q9NRH3 451 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 DEC1Q9P2X7 70 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 TRAF3IP3Q9Y228 551 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 CHTOPQ9Y3Y2 248 aaKnown RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 MYO9AB2RTY4 2548 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 MUC22E2RYF6 1773 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-222ENST00000545308 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
SNHG1-222ENST00000545308 LRRK1Q38SD2 2015 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 UBR5O95071 2799 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 IGHV1OR15-9A0A0B4J2B8 117 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 RBMY1BA6NDE4 496 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 RBMY1EA6NEQ0 496 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 GOLGA8TH3BQL2 631 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 BCL2L11O43521 198 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 SERF1AO75920 110 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 RBMY1DP0C7P1 496 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 P0C879 139 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 RBMY1A1P0DJD3 496 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 CCNB1P14635 433 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 GSTM3P21266 225 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 MAGEA1P43355 309 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 TFPI2P48307 235 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ARRB1P49407 418 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 TMED10P49755 219 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 CCNHP51946 323 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms