RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR5AK3PQ8NH89 298 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 MIPOL1Q8TD10 442 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KLF14Q8TD94 323 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 XAGE5Q8WWM1 108 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CNOT9Q92600 299 aaKnown RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 NSMAFQ92636 917 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 LHX4Q969G2 390 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ROPN1LQ96C74 230 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SLC25A36Q96CQ1 311 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 L3HYPDHQ96EM0 354 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FCRL1Q96LA6 429 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 WDFY2Q96P53 400 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KCNA7Q96RP8 456 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PRR25Q96S07 402 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM234AQ9H0X4 552 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KCNN2Q9H2S1 579 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PPA2Q9H2U2 334 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ELOVL3Q9HB03 270 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TUBG2Q9NRH3 451 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 MAN2C1Q9NTJ4 1040 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SERTAD4Q9NUC0 356 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 B3GAT1Q9P2W7 334 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SNX24Q9Y343 169 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 RYR2Q92736 4967 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 RNF103-CHMP3A0A140T963 221 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 A0A1B0GVI7 797 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RBMY1BA6NDE4 496 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RBMY1EA6NEQ0 496 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CLDN24A6NM45 220 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 ANGPTL7O43827 346 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 FZD7O75084 574 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 JTBO76095 146 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 C6orf47O95873 294 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PAHP00439 452 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 DBIP07108 87 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 INHBAP08476 426 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RBMY1DP0C7P1 496 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PATE4P0C8F1 98 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 THRBP10828 461 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 LAMP1P11279 417 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 IRF2P14316 349 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 NQO1P15559 274 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 TCP1P17987 556 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 NCF2P19878 526 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 GSTM3P21266 225 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PAICSP22234 425 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CCNOP22674 350 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 EEF1B2P24534 225 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 ARRB2P32121 409 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 MPV17P39210 176 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 MAGEA4P43358 317 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RPS5P46782 204 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CSNK1A1P48729 337 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PRKAA2P54646 552 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 AQP5P55064 265 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 FOXA1P55317 472 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 TPTEP56180 551 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RPL38P63173 70 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 HBA1P69905 142 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 COX10Q12887 443 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 FOXI1Q12951 378 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 BNIP2Q12982 314 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF181Q2M3W8 571 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF404Q494X3 552 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 GPAT3Q53EU6 434 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PLAC9Q5JTB6 97 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 LIPMQ5VYY2 423 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 FAM219BQ5XKK7 198 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 WDR25Q64LD2 544 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 IGFL4Q6B9Z1 124 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CCDC144NLQ6NUI1 221 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 UNQ9370/PRO34162Q6UXP9 181 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 DCDC5Q6ZRR9 648 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 Q6ZWC4 215 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 SLC16A14Q7RTX9 510 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CALHM3Q86XJ0 350 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 PEX5LQ8IYB4 626 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CADM2Q8N3J6 435 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 SCAIQ8N9R8 606 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 RBM15BQ8NDT2 890 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 SDR9C7Q8NEX9 313 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 OR2Z1Q8NG97 314 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 OR7A2PQ8NGA2 310 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CLHC1Q8NHS4 586 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 SLC25A40Q8TBP6 338 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 C10orf82Q8WW14 230 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 SLC38A4Q969I6 547 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 TUBGCP3Q96CW5 907 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 CCDC126Q96EE4 140 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 TECTBQ96PL2 329 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 OR2V2Q96R30 315 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM246Q9BRR3 403 aa3.34□□□□□ -1.87
SNHG1-220ENST00000544550 THAP7Q9BT49 309 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 MCRIP2Q9BUT9 160 aaKnown RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 DPCDQ9BVM2 203 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-220ENST00000544550 OR2J1Q9GZK6 312 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms